RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 NHEJ1Q9H9Q4 299 aaPredicted RBP13.12□□□□□ -0.31
CDH8-208ENST00000582980 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
CDH8-208ENST00000582980 LMCD1Q9NZU5 365 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 DPP7Q9UHL4 492 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 MYH10P35580 1976 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 RFXAPO00287 272 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 PRRG1O14668 218 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 TRIM66O15016 1216 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 TGM5O43548 720 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 IPO7O95373 1038 aaKnown RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 PLEKP08567 350 aaPredicted RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 CHRNB2P17787 502 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 CDH5P33151 784 aaPredicted RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 EIF4A3P38919 411 aaKnown RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 KIF11P52732 1056 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 SNX16P57768 344 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 DUSP4Q13115 394 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 MGAT5BQ3V5L5 792 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 LIN9Q5TKA1 542 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 GPR153Q6NV75 609 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 ATAD1Q8NBU5 361 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 UBA3Q8TBC4 463 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 CDCA3Q99618 268 aaPredicted RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 PRDM12Q9H4Q4 367 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 NSUN3Q9H649 340 aaKnown RBP13.11□□□□□ -0.31
CDH8-208ENST00000582980 TLE6Q9H808 572 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 CYP4F11Q9HBI6 524 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 ADAMTS1Q9UHI8 967 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
CDH8-208ENST00000582980 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 SOX1O00570 391 aaPredicted RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 XPO1O14980 1071 aaKnown RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 CLASP2O75122 1294 aaKnown RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 CYP1A1P04798 512 aaPredicted RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 HAPLN1P10915 354 aaPredicted RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 CYP2F1P24903 491 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 GRIK1P39086 918 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 GPD2P43304 727 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 NSFP46459 744 aaKnown RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 CLCN4P51793 760 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 MAP3K7CLP57077 242 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 NOMO3P69849 1222 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 PDE4CQ08493 712 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 PLD1Q13393 1074 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 SLC18A3Q16572 532 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 DUSP6Q16828 381 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 RTL10Q7L3V2 364 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 TMEM139Q8IV31 216 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 SCN4BQ8IWT1 228 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 TCEAL8Q8IYN2 117 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 C1orf131Q8NDD1 294 aaKnown RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 STK32AQ8WU08 396 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 C8orf48Q96LL4 319 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 MIS12Q9H081 205 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 CSNK1G1Q9HCP0 422 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
CDH8-208ENST00000582980 FBXW11Q9UKB1 542 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 CHD7Q9P2D1 2997 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 CHD9Q3L8U1 2897 aa13.1□□□□□ -0.31
CDH8-208ENST00000582980 SOWAHDA6NJG2 315 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 DDX3XO00571 662 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH8-208ENST00000582980 VNN2O95498 520 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 CFHP08603 1231 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 GZMAP12544 262 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 ACADSBP45954 432 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 PLA2G4AP47712 749 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 ALDH1A3P47895 512 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 CDR1P51861 262 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 CENPCQ03188 943 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 SPA17Q15506 151 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 ASTE1Q2TB18 679 aaPredicted RBP13.09□□□□□ -0.31
CDH8-208ENST00000582980 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 LILRA6Q6PI73 481 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
CDH8-208ENST00000582980 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 KREMEN2Q8NCW0 462 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 SLC30A5Q8TAD4 765 aa13.09□□□□□ -0.31
CDH8-208ENST00000582980 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms