RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 PSMD2Q13200 908 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 CFAP221Q4G0U5 840 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 USP39Q53GS9 565 aaKnown RBP14.55□□□□□ -0.08
SS18-222ENST00000582792 C11orf74Q86VG3 221 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 BRSK2Q8IWQ3 736 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 ARL14EPQ8N8R7 260 aaPredicted RBP14.55□□□□□ -0.08
SS18-222ENST00000582792 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 TTC16Q8NEE8 873 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 CCDC26Q8TAB7 109 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 CXorf38Q8TB03 319 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 SPATA18Q8TC71 538 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 SH3RF2Q8TEC5 729 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 FAM213AQ9BRX8 229 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 GDAP2Q9NXN4 497 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 GCNT4Q9P109 453 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 FAM208BQ5VWN6 2430 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 NUP205Q92621 2012 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 LNP1A1A4G5 178 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 C2orf78A6NCI8 922 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 GIPC1O14908 333 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 GBP1P32455 592 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 KCNA1Q09470 495 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 CCDC142Q17RM4 750 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 DAB2IPQ5VWQ8 1189 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 PMS2CLQ68D20 193 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 SCARA3Q6AZY7 606 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 DYMQ7RTS9 669 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 OSTM1Q86WC4 334 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 RASSF3Q86WH2 238 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 SPATA2LQ8IUW3 424 aaPredicted RBP14.54□□□□□ -0.08
SS18-222ENST00000582792 ZSWIM2Q8NEG5 633 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 TSTD1Q8NFU3 115 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 CACTINQ8WUQ7 758 aaKnown RBP14.54□□□□□ -0.08
SS18-222ENST00000582792 SAAL1Q96ER3 474 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 FUBP3Q96I24 572 aaKnown RBP eCLIP14.54□□□□□ -0.08
SS18-222ENST00000582792 RBAKQ9NYW8 714 aaPredicted RBP14.54□□□□□ -0.08
SS18-222ENST00000582792 SEL1LQ9UBV2 794 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 ITGA11Q9UKX5 1188 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 ARHGAP26Q9UNA1 814 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 EXOC7Q9UPT5 735 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 INVSQ9Y283 1065 aa14.54□□□□□ -0.08
SS18-222ENST00000582792 HELZP42694 1942 aaKnown RBP14.54□□□□□ -0.08
SS18-222ENST00000582792 GABRDO14764 452 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 NFATC1O95644 943 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 LDHAP00338 332 aaKnown RBP14.53□□□□□ -0.08
SS18-222ENST00000582792 ZSCAN22P10073 491 aaPredicted RBP14.53□□□□□ -0.08
SS18-222ENST00000582792 HDCP19113 662 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 PCSK1P29120 753 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 MAGEA11P43364 429 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 LHX1P48742 406 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 KCNB1Q14721 858 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 L1TD1Q5T7N2 865 aaKnown RBP14.53□□□□□ -0.08
SS18-222ENST00000582792 SCN4BQ8IWT1 228 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 ADGRF2Q8IZF7 708 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 CSGALNACT2Q8N6G5 542 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 TOP6BLQ8N6T0 577 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 USP33Q8TEY7 942 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 ACCSQ96QU6 501 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 TPSD1Q9BZJ3 242 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 LINC00597Q9H2U6 94 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 MRPL44Q9H9J2 332 aaKnown RBP14.53□□□□□ -0.08
SS18-222ENST00000582792 STK17AQ9UEE5 414 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 SNX9Q9Y5X1 595 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 MORC2Q9Y6X9 1032 aaPredicted RBP14.53□□□□□ -0.08
SS18-222ENST00000582792 IGF2RP11717 2491 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 ABCA7Q8IZY2 2146 aa14.53□□□□□ -0.08
SS18-222ENST00000582792 CACNA1GO43497 2377 aa14.52□□□□□ -0.08
SS18-222ENST00000582792 C1QTNF9BB2RNN3 333 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 K7EQS6 105 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 TULP1O00294 542 aaPredicted RBP14.52□□□□□ -0.09
SS18-222ENST00000582792 KHNYNO15037 678 aaKnown RBP14.52□□□□□ -0.09
SS18-222ENST00000582792 HCRTO43612 131 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 C1QTNF9P0C862 333 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 GAP43P17677 238 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 GARTP22102 1010 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 OPRD1P41143 372 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 PDE6CP51160 858 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 SEC13P55735 322 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 RBP5P82980 135 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 ZNF252P-AS1Q0IIN9 211 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 SF3A1Q15459 793 aaKnown RBP14.52□□□□□ -0.09
SS18-222ENST00000582792 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 SH3PXD2AQ5TCZ1 1133 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 FAM171BQ6P995 826 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 UNQ6494/PRO21346Q6UXR6 183 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 CYP2U1Q7Z449 544 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 EPSTI1Q96J88 318 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 FAM84AQ96KN4 292 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 SPATA17Q96L03 361 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 CNOT6LQ96LI5 555 aaKnown RBP14.52□□□□□ -0.09
SS18-222ENST00000582792 TMEM9BQ9NQ34 198 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 SIX4Q9UIU6 781 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 RALYQ9UKM9 306 aaKnown RBP14.52□□□□□ -0.09
SS18-222ENST00000582792 MMP17Q9ULZ9 603 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 WASF3Q9UPY6 502 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 THADAQ6YHU6 1953 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 WDFY3Q8IZQ1 3526 aa14.52□□□□□ -0.09
SS18-222ENST00000582792 DMXL2Q8TDJ6 3036 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 CDX4O14627 284 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms