RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 PCDHA7Q9UN72 937 aa18.72■□□□□ 0.59
CSNK1D-214ENST00000580565 TRAV19A0A0A6YYK7 116 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 PVALEFA0A1B0GWK0 134 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 TRDMT1O14717 391 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 F13A1P00488 732 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 HSP90AA1P07900 732 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 USP17L7P0C7H9 530 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 HOXA6P31267 233 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 CNR2P34972 360 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 AMPD2Q01433 879 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 FAM160A1Q05DH4 1040 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 GRSF1Q12849 480 aaKnown RBP eCLIP18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 SIM2Q14190 667 aaPredicted RBP18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 RESP18Q5W5W9 173 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 HEATR6Q6AI08 1181 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 ATL3Q6DD88 541 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 FSTL4Q6MZW2 842 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 VSTM1Q6UX27 236 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 PRR23BQ6ZRT6 265 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 HSCBQ8IWL3 235 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 FSIP1Q8NA03 581 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 CHFRQ96EP1 664 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 SPATA17Q96L03 361 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 SLC22A12Q96S37 553 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 CGRRF1Q99675 332 aa18.71■□□□□ 0.59
CSNK1D-214ENST00000580565 CKMP06732 381 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 FAM163BP0C2L3 166 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 BDNFP23560 247 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 GNL1P36915 607 aaPredicted RBP18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 GRIK1P39086 918 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 AFMP43652 599 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 CYP27A1Q02318 531 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 LMNB2Q03252 620 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 MTF1Q14872 753 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 BMT2Q1RMZ1 405 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 MYCBPAPQ8TBZ2 947 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 CEP295NLQ96MC4 621 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 MRPL45Q9BRJ2 306 aaKnown RBP18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 SNX25Q9H3E2 840 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 SLC39A2Q9NP94 309 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 PARD6AQ9NPB6 346 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 GCNT4Q9P109 453 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 CGNQ9P2M7 1197 aaKnown RBP18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 USP18Q9UMW8 372 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 GTF3C3Q9Y5Q9 886 aa18.7■□□□□ 0.58
CSNK1D-214ENST00000580565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 C2orf78A6NCI8 922 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 PRR5-ARHGAP8B1AHC4 643 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 TACC1O75410 805 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 RETP07949 1114 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 SDHBP21912 280 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 HOXC13P31276 330 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 GALK1P51570 392 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 ARHGAP8P85298 464 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 SRSF5Q13243 272 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 CUL4BQ13620 913 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 ZNF77Q15935 545 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 KNOP1Q1ED39 458 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 WDR72Q3MJ13 1102 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 PKN3Q6P5Z2 889 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 C12orf56Q8IXR9 622 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 CPA6Q8N4T0 437 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 ARL14EPQ8N8R7 260 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 TTC16Q8NEE8 873 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 OSCP1Q8WVF1 389 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 ZNF516Q92618 1163 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 PCED1BQ96HM7 432 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 GZF1Q9H116 711 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 FBRSL1Q9HCM7 1045 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 DUS2Q9NX74 493 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 CFAP45Q9UL16 551 aa18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 NUP210Q8TEM1 1887 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-214ENST00000580565 ATG13O75143 517 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 HDCP19113 662 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 ANXA13P27216 316 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 GJA4P35212 333 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 USP46P62068 366 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 TNNC1P63316 161 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 SPEM2Q0P670 501 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 TRPC3Q13507 836 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 MDH1BQ5I0G3 518 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 WDR5BQ86VZ2 330 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 OR6B3Q8NGW1 331 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 SH3RF2Q8TEC5 729 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 ECT2Q9H8V3 914 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 RCOR1Q9UKL0 485 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 NME7Q9Y5B8 376 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 DNAH14Q0VDD8 3507 aa18.68■□□□□ 0.58
CSNK1D-214ENST00000580565 CEP250Q9BV73 2442 aa18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 MED19A0JLT2 244 aaPredicted RBP18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 EXOC3O60645 756 aa18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 STAU1O95793 577 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 EGFP01133 1207 aa18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 PTPN1P18031 435 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 DRD1P21728 446 aa18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 IFNAR2P48551 515 aa18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 PDE6CP51160 858 aa18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 MYL6P60660 151 aa18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 DNM1Q05193 864 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-214ENST00000580565 USP4Q13107 963 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms