RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 VSTM1Q6UX27 236 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 USP49Q70CQ1 688 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 GPD1LQ8N335 351 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 RPLP0P6Q8NHW5 317 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 DNAJC19Q96DA6 116 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 CHFRQ96EP1 664 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 HPDLQ96IR7 371 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 PDE11AQ9HCR9 933 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 TRPM5Q9NZQ8 1165 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 CDH9Q9ULB4 789 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 GOLGA8IPA6NC78 632 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 GOLGA8JA6NMD2 632 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 GABRDO14764 452 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 GRIK1P39086 918 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 DMC1Q14565 340 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 PLK5Q496M5 336 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 ARL14EPQ8N8R7 260 aaPredicted RBP19.16■□□□□ 0.66
MKS1-209ENST00000580127 SPATA17Q96L03 361 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 IKZF4Q9H2S9 585 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 PCIF1Q9H4Z3 704 aa19.16■□□□□ 0.66
MKS1-209ENST00000580127 FBRSL1Q9HCM7 1045 aaKnown RBP19.16■□□□□ 0.66
MKS1-209ENST00000580127 FBXO2Q9UK22 296 aaPredicted RBP19.16■□□□□ 0.66
MKS1-209ENST00000580127 SLC9A3R1O14745 358 aaPredicted RBP19.15■□□□□ 0.66
MKS1-209ENST00000580127 CD2BP2O95400 341 aaKnown RBP19.15■□□□□ 0.66
MKS1-209ENST00000580127 TCF3P15923 654 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 GBP1P32455 592 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 DGKEP52429 567 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 ZNF77Q15935 545 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 CCDC6Q16204 474 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 SOWAHAQ2M3V2 549 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 PLA2G2CQ5R387 149 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 RNF43Q68DV7 783 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 FAM171BQ6P995 826 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 KIAA1958Q8N8K9 716 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 SH3RF2Q8TEC5 729 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 HHIPQ96QV1 700 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 MMS19Q96T76 1030 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 PANK2Q9BZ23 570 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 INTS13Q9NVM9 706 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 WNT6Q9Y6F9 365 aa19.15■□□□□ 0.66
MKS1-209ENST00000580127 TRIM66O15016 1216 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 KRT37O76014 449 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 CAVIN2O95810 425 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 FAM163BP0C2L3 166 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 AMPD3Q01432 767 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 CREB5Q02930 508 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 CEBPZQ03701 1054 aaKnown RBP19.14■□□□□ 0.65
MKS1-209ENST00000580127 EML3Q32P44 896 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 DENND5BQ6ZUT9 1274 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 TSTD1Q8NFU3 115 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 PKMYT1Q99640 499 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 SYT15Q9BQS2 421 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 CBWD1Q9BRT8 395 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 LSM14BQ9BX40 385 aaKnown RBP19.14■□□□□ 0.65
MKS1-209ENST00000580127 MTMR12Q9C0I1 747 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 SNX25Q9H3E2 840 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 ARHGAP26Q9UNA1 814 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 OBSL1O75147 1896 aa19.14■□□□□ 0.65
MKS1-209ENST00000580127 TM4SF5O14894 197 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 ALDH1A2O94788 518 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 PRPF6O94906 941 aaKnown RBP19.13■□□□□ 0.65
MKS1-209ENST00000580127 CYP27A1Q02318 531 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 N4BP2L1Q5TBK1 243 aaPredicted RBP19.13■□□□□ 0.65
MKS1-209ENST00000580127 DAB2IPQ5VWQ8 1189 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 STKLD1Q8NE28 680 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 CLIC6Q96NY7 704 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 DUSP15Q9H1R2 295 aaPredicted RBP19.13■□□□□ 0.65
MKS1-209ENST00000580127 LINC00597Q9H2U6 94 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 GCNT4Q9P109 453 aa19.13■□□□□ 0.65
MKS1-209ENST00000580127 FRMD3A2A2Y4 597 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 C2orf78A6NCI8 922 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 PDGFRBP09619 1106 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 BDNFP23560 247 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 HOXC13P31276 330 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 GNL1P36915 607 aaPredicted RBP19.12■□□□□ 0.65
MKS1-209ENST00000580127 CASP5P51878 434 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 USP4Q13107 963 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 SLC39A14Q15043 492 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 TDRD10Q5VZ19 366 aaKnown RBP19.12■□□□□ 0.65
MKS1-209ENST00000580127 OSTM1Q86WC4 334 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 ZSWIM2Q8NEG5 633 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 CXorf38Q8TB03 319 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 FNBP1Q96RU3 617 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 SLC22A12Q96S37 553 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 SIX4Q9UIU6 781 aa19.12■□□□□ 0.65
MKS1-209ENST00000580127 CHD8Q9HCK8 2581 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 BCLAF3A2AJT9 711 aaKnown RBP19.11■□□□□ 0.65
MKS1-209ENST00000580127 KHNYNO15037 678 aaKnown RBP19.11■□□□□ 0.65
MKS1-209ENST00000580127 TADA3O75528 432 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 ABL1P00519 1130 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 WARSP23381 471 aaKnown RBP19.11■□□□□ 0.65
MKS1-209ENST00000580127 WNT7BP56706 349 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 MRPS21P82921 87 aaKnown RBP19.11■□□□□ 0.65
MKS1-209ENST00000580127 SHC2P98077 582 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 CUL4AQ13619 759 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 BYSLQ13895 437 aaKnown RBP19.11■□□□□ 0.65
MKS1-209ENST00000580127 C2orf27AQ580R0 203 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 HS2ST1Q7LGA3 356 aa19.11■□□□□ 0.65
MKS1-209ENST00000580127 DDX42Q86XP3 938 aaKnown RBP eCLIP19.11■□□□□ 0.65
MKS1-209ENST00000580127 WDR49Q8IV35 697 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms