RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 TSPAN16Q9UKR8 245 aa4.88□□□□□ -1.63
NUP85-213ENST00000579838 MTUS1Q9ULD2 1270 aa4.88□□□□□ -1.63
NUP85-213ENST00000579838 BARX2Q9UMQ3 279 aaPredicted RBP4.88□□□□□ -1.63
NUP85-213ENST00000579838 NOVA2Q9UNW9 492 aaKnown RBP4.88□□□□□ -1.63
NUP85-213ENST00000579838 C2CD2Q9Y426 696 aa4.88□□□□□ -1.63
NUP85-213ENST00000579838 PASKQ96RG2 1323 aa4.88□□□□□ -1.63
NUP85-213ENST00000579838 SMIM28A0A1B0GU29 152 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 TCRBV7S3A2A0A539 114 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 C17orf102A2RUQ5 167 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 LRRD1A4D1F6 860 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 MANSC4A6NHS7 340 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 SMIM23A6NLE4 172 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 C2CD4BA6NLJ0 364 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 PODXLO00592 558 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 PIRO00625 290 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 EIF3HO15372 352 aaKnown RBP eCLIP4.87□□□□□ -1.63
NUP85-213ENST00000579838 PAPSS1O43252 624 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 MED7O43513 233 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ATP2C2O75185 946 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 NUDT17P0C025 328 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 KRT3P12035 628 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ATF2P15336 505 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CREB1P16220 341 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ATF7P17544 494 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 NR1D1P20393 614 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 GPD1P21695 349 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 KDELR1P24390 212 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 LMO2P25791 158 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 GCAP28676 217 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 MIPP30301 263 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 HPDP32754 393 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 PTPN7P35236 360 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 RGS2P41220 211 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ATXN1P54253 815 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 DYNLT1P63172 113 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 IFI35P80217 286 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 RBP5P82980 135 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 OTUD4Q01804 1114 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 PDE4CQ08493 712 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 MGAT3Q09327 533 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 MTMR3Q13615 1198 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 BYSLQ13895 437 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 SLC29A2Q14542 456 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ZNF268Q14587 947 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 FASTKD3Q14CZ7 662 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 PPP1R7Q15435 360 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CLUL1Q15846 466 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 PPP2R5EQ16537 467 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CCNG2Q16589 344 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 FSCN1Q16658 493 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 SOWAHAQ2M3V2 549 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CCDC14Q49A88 953 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ZC3H12AQ5D1E8 599 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 XKR4Q5GH76 650 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 TNFAIP8L3Q5GJ75 292 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 SPDYCQ5MJ68 293 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 FAM102AQ5T9C2 384 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 EMC10Q5UCC4 262 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 OTUD1Q5VV17 481 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 KIAA0319Q5VV43 1072 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ANKRD22Q5VYY1 191 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 OR6B2Q6IFH4 312 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 GDF6Q6KF10 455 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 HIBCHQ6NVY1 386 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 PMF1Q6P1K2 205 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 DCUN1D2Q6PH85 259 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 LCLAT1Q6UWP7 414 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 OLFML1Q6UWY5 402 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 LIMS2Q7Z4I7 341 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CTU1Q7Z7A3 348 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 SAPCD2Q86UD0 394 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 SESTD1Q86VW0 696 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CCDC25Q86WR0 208 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 UNC45BQ8IWX7 931 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 RCOR2Q8IZ40 523 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CYP4X1Q8N118 509 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ALLCQ8N6M5 410 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 SLC35B2Q8TB61 432 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 MDM1Q8TC05 714 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 LRRN4Q8WUT4 740 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 RXFP2Q8WXD0 754 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 NDRG1Q92597 394 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 HSPH1Q92598 858 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 LPPQ93052 612 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 SNF8Q96H20 258 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CCDC114Q96M63 670 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 HEXIM2Q96MH2 286 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 CFAP57Q96MR6 1250 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 RUFY1Q96T51 708 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 APBA2Q99767 749 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 ADPGKQ9BRR6 497 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CAPS2Q9BXY5 557 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 SLC4A5Q9BY07 1137 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 B3GNT5Q9BYG0 378 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 GCOM2Q9BZD3 368 aaPredicted RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 UPF3AQ9H1J1 476 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 PABPC3Q9H361 631 aaKnown RBP4.87□□□□□ -1.63
NUP85-213ENST00000579838 CENPHQ9H3R5 247 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 CALCOCO1Q9P1Z2 691 aa4.87□□□□□ -1.63
NUP85-213ENST00000579838 WHRNQ9P202 907 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms