RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ZNF707Q96C28 371 aaPredicted RBP16.51■□□□□ 0.23
SLC6A4-205ENST00000579221 C8orf48Q96LL4 319 aa16.51■□□□□ 0.23
SLC6A4-205ENST00000579221 CEP295NLQ96MC4 621 aa16.51■□□□□ 0.23
SLC6A4-205ENST00000579221 ZNF518BQ9C0D4 1074 aa16.51■□□□□ 0.23
SLC6A4-205ENST00000579221 PRDM6Q9NQX0 595 aa16.51■□□□□ 0.23
SLC6A4-205ENST00000579221 MYO7AQ13402 2215 aa16.51■□□□□ 0.23
SLC6A4-205ENST00000579221 EPHB6O15197 1021 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 CYP26A1O43174 497 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 AP1G2O75843 785 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 FAM200BP0CF97 657 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 STAT1P42224 750 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 SLC8A3P57103 927 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 SMAD4Q13485 552 aaKnown RBP16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 SARM1Q6SZW1 724 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 DNAJB7Q7Z6W7 309 aaPredicted RBP16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 ANKRD52Q8NB46 1076 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 GIPC2Q8TF65 315 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 SPATA17Q96L03 361 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 DUSP16Q9BY84 665 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 EDEM3Q9BZQ6 932 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 THEGQ9P2T0 379 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 HESX1Q9UBX0 185 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 FAM50BQ9Y247 325 aa16.5■□□□□ 0.23
SLC6A4-205ENST00000579221 TRANK1O15050 2925 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 MBTPS2O43462 519 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 CSH1P0DML2 217 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 CSH2P0DML3 217 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 GNA15P30679 374 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 CLCN1P35523 988 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 SOX5P35711 763 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 PBX1P40424 430 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 GPR15P49685 360 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 PLXNA3P51805 1871 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 FIGNQ5HY92 759 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 LCLAT1Q6UWP7 414 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 IQCDQ96DY2 449 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 NECTIN4Q96NY8 510 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 GPR88Q9GZN0 384 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 CSNK1G1Q9HCP0 422 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 DMAP1Q9NPF5 467 aaPredicted RBP16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 KRT82Q9NSB4 513 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 DNMT3BQ9UBC3 853 aaKnown RBP16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.49■□□□□ 0.23
SLC6A4-205ENST00000579221 SLC38A8A6NNN8 435 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 F8VP50 259 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 F8VZ95 297 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 THAP12O43422 761 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 ATF6P18850 670 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 BRD2P25440 801 aaKnown RBP16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 MAP3K7CLP57077 242 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 JAM2P57087 298 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 GOLGA7BQ2TAP0 167 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 CYP4A22Q5TCH4 519 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 SDHAF4Q5VUM1 108 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 GRASPQ7Z6J2 395 aaPredicted RBP16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 LEMD2Q8NC56 503 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 GPR152Q8TDT2 470 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 ATXN2LQ8WWM7 1075 aaKnown RBP16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 ZNF606Q8WXB4 792 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 TFAP2BQ92481 460 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 PSMG2Q969U7 264 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 KCNK16Q96T55 309 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 SMOQ99835 787 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 CORO1BQ9BR76 489 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 UBXN6Q9BZV1 441 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 TSPAN16Q9UKR8 245 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 MYO6Q9UM54 1294 aa16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 USP15Q9Y4E8 981 aaPredicted RBP16.48■□□□□ 0.23
SLC6A4-205ENST00000579221 GRXCR2A6NFK2 248 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 O00370 1275 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 ZNF197O14709 1029 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 BEST1O76090 585 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 GFPT2O94808 682 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 FGF19O95750 216 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 CALCAP01258 141 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 RHOP08100 348 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 CCDC172P0C7W6 258 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 NPR3P17342 541 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 TFF2Q03403 129 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 PTCRAQ6ISU1 281 aaPredicted RBP16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 CLEC20AQ6ZU45 233 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 NUP93Q8N1F7 819 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 ZNF397Q8NF99 534 aaPredicted RBP16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 UBA3Q8TBC4 463 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 SUSD6Q92537 303 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 WDR6Q9NNW5 1121 aaKnown RBP16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 AVENQ9NQS1 362 aaPredicted RBP16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 ASAH2Q9NR71 780 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 HCFC1R1Q9NWW0 138 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 COMMD8Q9NX08 183 aa16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.47■□□□□ 0.23
SLC6A4-205ENST00000579221 SZT2Q5T011 3432 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms