RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 GNL1P36915 607 aaPredicted RBP12.33□□□□□ -0.44
SSH2-208ENST00000579040 SOX9P48436 509 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 PDE6CP51160 858 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
SSH2-208ENST00000579040 TRPC3Q13507 836 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 WDR72Q3MJ13 1102 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 TXNDC11Q6PKC3 985 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 STKLD1Q8NE28 680 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 MYCBPAPQ8TBZ2 947 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 MYLPFQ96A32 169 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 SMG9Q9H0W8 520 aaKnown RBP12.33□□□□□ -0.44
SSH2-208ENST00000579040 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
SSH2-208ENST00000579040 EPC1Q9H2F5 836 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 GKN1Q9NS71 199 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 DMAC2Q9NW81 257 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 EHD2Q9NZN4 543 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 HPSEQ9Y251 543 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 CEP250Q9BV73 2442 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 RALGAPA1Q6GYQ0 2036 aa12.33□□□□□ -0.44
SSH2-208ENST00000579040 TRAV19A0A0A6YYK7 116 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 FAM237AA0A1B0GTK4 181 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 A0A1B0GVL5 298 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 PDXKO00764 312 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 PHACTR2O75167 634 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 PDGFRBP09619 1106 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 USP17L7P0C7H9 530 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 BDNFP23560 247 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 ANXA13P27216 316 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 CXCL12P48061 93 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 MYL6P60660 151 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 CLDN10P78369 228 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 AMPD2Q01433 879 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 CYP27A1Q02318 531 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 FAM160A1Q05DH4 1040 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 TNK2Q07912 1038 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 STK4Q13043 487 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 USP4Q13107 963 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 RUNX3Q13761 415 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 PDGFRLQ15198 375 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 CC2D1AQ6P1N0 951 aaPredicted RBP12.32□□□□□ -0.44
SSH2-208ENST00000579040 OR6B3Q8NGW1 331 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 PARD3BQ8TEW8 1205 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 CCDC47Q96A33 483 aaKnown RBP12.32□□□□□ -0.44
SSH2-208ENST00000579040 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 MRPL45Q9BRJ2 306 aaKnown RBP12.32□□□□□ -0.44
SSH2-208ENST00000579040 SCAND2PQ9GZW5 306 aaPredicted RBP12.32□□□□□ -0.44
SSH2-208ENST00000579040 XYLT2Q9H1B5 865 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 KCTD10Q9H3F6 313 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 ZDHHC9Q9Y397 364 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 KIAA1549LQ6ZVL6 1849 aa12.32□□□□□ -0.44
SSH2-208ENST00000579040 MYO16Q9Y6X6 1858 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 KIF20AO95235 890 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 CKMP06732 381 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 TCF3P15923 654 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
SSH2-208ENST00000579040 GRIK1P39086 918 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 SYKP43405 635 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 PPP3CCP48454 512 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
SSH2-208ENST00000579040 BIRC3Q13489 604 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 CCINQ13939 588 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 GAS6Q14393 721 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 KCNB1Q14721 858 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 PON2Q15165 354 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 ZNF77Q15935 545 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 MDH1BQ5I0G3 518 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 TDRD10Q5VZ19 366 aaKnown RBP12.31□□□□□ -0.44
SSH2-208ENST00000579040 TSSK4Q6SA08 328 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 DENND5BQ6ZUT9 1274 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
SSH2-208ENST00000579040 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 C8orf48Q96LL4 319 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 TTLL2Q9BWV7 592 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 ELOVL4Q9GZR5 314 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 TRPC7Q9HCX4 862 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 HPS4Q9NQG7 708 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 RBM12Q9NTZ6 932 aaKnown RBP12.31□□□□□ -0.44
SSH2-208ENST00000579040 GCNT4Q9P109 453 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 NCDNQ9UBB6 729 aa12.31□□□□□ -0.44
SSH2-208ENST00000579040 SMG5Q9UPR3 1016 aaKnown RBP12.31□□□□□ -0.44
SSH2-208ENST00000579040 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 A0A1W2PQD8 194 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 LRRIQ3A6PVS8 624 aaPredicted RBP12.3□□□□□ -0.44
SSH2-208ENST00000579040 A8MXQ7 604 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 TRDMT1O14717 391 aaKnown RBP12.3□□□□□ -0.44
SSH2-208ENST00000579040 MAPK13O15264 365 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 NR3C1P04150 777 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 RPN1P04843 607 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms