RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 SMARCB1Q12824 385 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 STILQ15468 1287 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 CCDC85BQ15834 202 aaPredicted RBP12.86□□□□□ -0.35
IFT20-207ENST00000578547 DENND1BQ6P3S1 775 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 SCN4BQ8IWT1 228 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 VN1R2Q8NFZ6 395 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 C2orf15Q8WU43 125 aaKnown RBP12.86□□□□□ -0.35
IFT20-207ENST00000578547 SMARCD1Q96GM5 515 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 CRISPLD1Q9H336 500 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 CDH23Q9H251 3354 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 LINC01565O15544 149 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 PLEKP08567 350 aaPredicted RBP12.85□□□□□ -0.35
IFT20-207ENST00000578547 ATF2P15336 505 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 CHRNB2P17787 502 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 GRIK1P39086 918 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 GPR15P49685 360 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 BCAT1P54687 386 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 MAP3K7CLP57077 242 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 GSDMDP57764 484 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 CDR2Q01850 454 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 ADAM15Q13444 863 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 KCNC3Q14003 757 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 CNGA2Q16280 664 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 CFAP221Q4G0U5 840 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 LIN9Q5TKA1 542 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 SDHAF4Q5VUM1 108 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 LCLAT1Q6UWP7 414 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 TTC30AQ86WT1 665 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 SLC7A14Q8TBB6 771 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 GPR152Q8TDT2 470 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 PPM1EQ8WY54 764 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 DDX1Q92499 740 aaKnown RBP12.85□□□□□ -0.35
IFT20-207ENST00000578547 FUBP3Q96I24 572 aaKnown RBP eCLIP12.85□□□□□ -0.35
IFT20-207ENST00000578547 PANX2Q96RD6 677 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
IFT20-207ENST00000578547 AGPAT1Q99943 283 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 ABCB6Q9NP58 842 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 DMAP1Q9NPF5 467 aaPredicted RBP12.85□□□□□ -0.35
IFT20-207ENST00000578547 MAN1C1Q9NR34 630 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 FBXW11Q9UKB1 542 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 CEP83Q9Y592 693 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 HCFC2Q9Y5Z7 792 aa12.85□□□□□ -0.35
IFT20-207ENST00000578547 F8VP50 259 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 BEST1O76090 585 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 C8AP07357 584 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 HAPLN1P10915 354 aaPredicted RBP12.84□□□□□ -0.35
IFT20-207ENST00000578547 NPR3P17342 541 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 TNFAIP3P21580 790 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 ANXA13P27216 316 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 HNRNPH3P31942 346 aaKnown RBP12.84□□□□□ -0.35
IFT20-207ENST00000578547 PRKCIP41743 596 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 SLC8A3P57103 927 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 FMO1Q01740 532 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 PDE4CQ08493 712 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 BST2Q10589 180 aaKnown RBP12.84□□□□□ -0.35
IFT20-207ENST00000578547 MEA1Q16626 185 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 DDR2Q16832 855 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 HGSNATQ68CP4 663 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 EP400NLQ6ZTU2 488 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 CLEC20AQ6ZU45 233 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 ZNF571Q7Z3V5 609 aaPredicted RBP12.84□□□□□ -0.35
IFT20-207ENST00000578547 ZNF677Q86XU0 584 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 ANKRD52Q8NB46 1076 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 C1orf131Q8NDD1 294 aaKnown RBP12.84□□□□□ -0.35
IFT20-207ENST00000578547 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 SECISBP2LQ93073 1101 aaKnown RBP12.84□□□□□ -0.35
IFT20-207ENST00000578547 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 SMOQ99835 787 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.84□□□□□ -0.35
IFT20-207ENST00000578547 DEF6Q9H4E7 631 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 ARHGAP20Q9P2F6 1191 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
IFT20-207ENST00000578547 PTPRDP23468 1912 aa12.84□□□□□ -0.35
IFT20-207ENST00000578547 TULP2O00295 520 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 TRIM66O15016 1216 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 GLP2RO95838 553 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 C1RP00736 705 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 SETSIPP0DME0 302 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 EIF4A3P38919 411 aaKnown RBP12.83□□□□□ -0.36
IFT20-207ENST00000578547 MAGEA11P43364 429 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 ALDH1A3P47895 512 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.36
IFT20-207ENST00000578547 RGS7P49802 495 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 TWF1Q12792 350 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 IFRD2Q12894 506 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms