RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 ALLCQ8N6M5 410 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 TTC16Q8NEE8 873 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 OR10T2Q8NGX3 314 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 HMGB4Q8WW32 186 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 CYP2S1Q96SQ9 504 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 ADPGKQ9BRR6 497 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 RNF26Q9BY78 433 aaPredicted RBP8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 SEMA4CQ9C0C4 833 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 IL21RQ9HBE5 538 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 PTPRHQ9HD43 1115 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 CD93Q9NPY3 652 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 SH3GLB2Q9NR46 395 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 FKBPLQ9UIM3 349 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 AHCTF1Q8WYP5 2266 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 TSC2P49815 1807 aa8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 UTP20O75691 2785 aaKnown RBP8.73□□□□□ -1.01
SLC46A1-201ENST00000578217 TLN1Q9Y490 2541 aaKnown RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 TLX3O43711 291 aaPredicted RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 DKK1O94907 266 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 KLF8O95600 359 aaPredicted RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 F11P03951 625 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 SPATA31C1P0DKV0 1188 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 HMGA1P17096 107 aaKnown RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 EIF2S3P41091 472 aaKnown RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ABCG1P45844 678 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 GPR15P49685 360 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ATXN3P54252 364 aaPredicted RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 CLDN6P56747 220 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 YWHAHQ04917 246 aaPredicted RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 PTPAQ15257 358 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 EML3Q32P44 896 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ZC2HC1CQ53FD0 456 aaPredicted RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 Q6ZUG5 572 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ZBTB8OSQ8IWT0 167 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 IL17RCQ8NAC3 791 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 APPL2Q8NEU8 664 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ERLEC1Q96DZ1 483 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ZBTB45Q96K62 511 aaPredicted RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 SEPT5Q99719 369 aaPredicted RBP8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ANO2Q9NQ90 1003 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 TDP1Q9NUW8 608 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 CNTN3Q9P232 1028 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 PCOLCE2Q9UKZ9 415 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ASB3Q9Y575 518 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 ANAPC1Q9H1A4 1944 aa8.72□□□□□ -1.01
SLC46A1-201ENST00000578217 SCN1AP35498 2009 aa8.71□□□□□ -1.01
SLC46A1-201ENST00000578217 NBASA2RRP1 2371 aa8.71□□□□□ -1.01
SLC46A1-201ENST00000578217 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 CCNT1O60563 726 aaKnown RBP8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 RPL9P32969 192 aaKnown RBP8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 HSPA4P34932 840 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 SLC6A11P48066 632 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 AARSP49588 968 aaKnown RBP eCLIP8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 NLRP12P59046 1061 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 ZXDBP98169 803 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 BNC1Q01954 994 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 MTF1Q14872 753 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 ZNF77Q15935 545 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 SLC10A6Q3KNW5 377 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 SDHAF4Q5VUM1 108 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 PPP4R3AQ6IN85 833 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 GLRX5Q86SX6 157 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 LRRTM3Q86VH5 581 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 C12orf40Q86WS4 652 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 EFCAB13Q8IY85 973 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 TXNDC5Q8NBS9 432 aaKnown RBP8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 ACAP3Q96P50 834 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 DUS2Q9NX74 493 aaKnown RBP8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 HCN2Q9UL51 889 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 BTBD3Q9Y2F9 522 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 USP9YO00507 2555 aaPredicted RBP8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 ABCA12Q86UK0 2595 aa8.71□□□□□ -1.02
SLC46A1-201ENST00000578217 SCAMP3O14828 347 aaKnown RBP8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 MARCH6O60337 910 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 MED24O75448 989 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 MAOBP27338 520 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 MARCKSP29966 332 aaPredicted RBP8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 PDIA3P30101 505 aaKnown RBP8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 CDC25CP30307 473 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 HOXD12P35452 270 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 AVPR1AP37288 418 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 AKAP17AQ02040 695 aaKnown RBP8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 RPL6Q02878 288 aaKnown RBP8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 CFHR1Q03591 330 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 ZNF33AQ06730 810 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 BFSP1Q12934 665 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 MYO1EQ12965 1108 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 USP4Q13107 963 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 HNRNPDQ14103 355 aaKnown RBP8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 PDGFRLQ15198 375 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 TSGA10IPQ3SY00 556 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 ZNF568Q3ZCX4 644 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 PIK3AP1Q6ZUJ8 805 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 KRT25Q7Z3Z0 450 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 NEK8Q86SG6 692 aa8.7□□□□□ -1.02
SLC46A1-201ENST00000578217 CPA6Q8N4T0 437 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms