RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SLITRK1Q96PX8 696 aa15.07■□□□□ 0
SMG6-215ENST00000574501 PHF12Q96QT6 1004 aa15.07■□□□□ 0
SMG6-215ENST00000574501 RAB20Q9NX57 234 aa15.07■□□□□ 0
SMG6-215ENST00000574501 KCNK4Q9NYG8 393 aa15.07■□□□□ 0
SMG6-215ENST00000574501 PTTG2Q9NZH5 202 aa15.07■□□□□ 0
SMG6-215ENST00000574501 COL14A1Q05707 1796 aaKnown RBP15.07■□□□□ 0
SMG6-215ENST00000574501 C15orf38-AP3S2A0A0A6YYH1 394 aa15.07■□□□□ 0
SMG6-215ENST00000574501 TLR3O15455 904 aaKnown RBP15.07■□□□□ 0
SMG6-215ENST00000574501 KRT1P04264 644 aa15.07■□□□□ 0
SMG6-215ENST00000574501 C6orf222P0C671 652 aaPredicted RBP15.07■□□□□ 0
SMG6-215ENST00000574501 CCDC166P0CW27 439 aa15.07■□□□□ 0
SMG6-215ENST00000574501 SMIM18P0DKX4 95 aa15.07■□□□□ 0
SMG6-215ENST00000574501 STIP1P31948 543 aaKnown RBP15.07■□□□□ 0
SMG6-215ENST00000574501 DSG3P32926 999 aa15.07■□□□□ 0
SMG6-215ENST00000574501 GALK1P51570 392 aa15.07■□□□□ 0
SMG6-215ENST00000574501 TMPRSS15P98073 1019 aa15.07■□□□□ 0
SMG6-215ENST00000574501 BST1Q10588 318 aa15.07■□□□□ 0
SMG6-215ENST00000574501 MAMLD1Q13495 774 aa15.07■□□□□ 0
SMG6-215ENST00000574501 SNRNP35Q16560 246 aaKnown RBP15.07■□□□□ 0
SMG6-215ENST00000574501 EFHC1Q5JVL4 640 aa15.07■□□□□ 0
SMG6-215ENST00000574501 DUS1LQ6P1R4 473 aaKnown RBP15.07■□□□□ 0
SMG6-215ENST00000574501 B3GNT6Q6ZMB0 384 aa15.07■□□□□ 0
SMG6-215ENST00000574501 ARPINQ7Z6K5 226 aa15.07■□□□□ 0
SMG6-215ENST00000574501 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
SMG6-215ENST00000574501 POU5F2Q8N7G0 328 aa15.07■□□□□ 0
SMG6-215ENST00000574501 PRICKLE1Q96MT3 831 aaPredicted RBP15.07■□□□□ 0
SMG6-215ENST00000574501 GCNAQ96QF7 691 aa15.07■□□□□ 0
SMG6-215ENST00000574501 CCDC106Q9BWC9 280 aa15.07■□□□□ 0
SMG6-215ENST00000574501 UNC45AQ9H3U1 944 aa15.07■□□□□ 0
SMG6-215ENST00000574501 USP29Q9HBJ7 922 aa15.07■□□□□ 0
SMG6-215ENST00000574501 CNTN3Q9P232 1028 aa15.07■□□□□ 0
SMG6-215ENST00000574501 PCDHGB4Q9UN71 923 aa15.07■□□□□ 0
SMG6-215ENST00000574501 PCDHGB5Q9Y5G0 923 aa15.07■□□□□ 0
SMG6-215ENST00000574501 SPDYE16A6NNV3 312 aaPredicted RBP15.06■□□□□ 0
SMG6-215ENST00000574501 I3L4J1 428 aa15.06■□□□□ 0
SMG6-215ENST00000574501 FAM155BO75949 473 aa15.06■□□□□ 0
SMG6-215ENST00000574501 UFL1O94874 794 aa15.06■□□□□ 0
SMG6-215ENST00000574501 HNRNPCP07910 306 aaKnown RBP eCLIP15.06■□□□□ 0
SMG6-215ENST00000574501 SERPINB6P35237 376 aa15.06■□□□□ 0
SMG6-215ENST00000574501 GDF10P55107 478 aa15.06■□□□□ 0
SMG6-215ENST00000574501 FOLH1Q04609 750 aa15.06■□□□□ 0
SMG6-215ENST00000574501 SYCP2LQ5T4T6 812 aa15.06■□□□□ 0
SMG6-215ENST00000574501 FBXL13Q8NEE6 735 aa15.06■□□□□ 0
SMG6-215ENST00000574501 EBF4Q9BQW3 602 aa15.06■□□□□ 0
SMG6-215ENST00000574501 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.06■□□□□ 0
SMG6-215ENST00000574501 POLIQ9UNA4 740 aa15.06■□□□□ 0
SMG6-215ENST00000574501 GAKO14976 1311 aa15.06■□□□□ 0
SMG6-215ENST00000574501 PIM1P11309 404 aaPredicted RBP15.06■□□□□ 0
SMG6-215ENST00000574501 ATP6V1B1P15313 513 aa15.06■□□□□ 0
SMG6-215ENST00000574501 CPOXP36551 454 aa15.06■□□□□ 0
SMG6-215ENST00000574501 GPC3P51654 580 aa15.06■□□□□ 0
SMG6-215ENST00000574501 VCPP55072 806 aaKnown RBP15.06■□□□□ 0
SMG6-215ENST00000574501 ADARP55265 1226 aaKnown RBP15.06■□□□□ 0
SMG6-215ENST00000574501 DYNLT1P63172 113 aa15.06■□□□□ 0
SMG6-215ENST00000574501 GPSM2P81274 684 aa15.06■□□□□ 0
SMG6-215ENST00000574501 TBL3Q12788 808 aaKnown RBP15.06■□□□□ 0
SMG6-215ENST00000574501 OASLQ15646 514 aaKnown RBP15.06■□□□□ 0
SMG6-215ENST00000574501 GRAMD1BQ3KR37 738 aa15.06■□□□□ 0
SMG6-215ENST00000574501 ANKRD20A4Q4UJ75 823 aa15.06■□□□□ 0
SMG6-215ENST00000574501 TMEM259Q4ZIN3 620 aa15.06■□□□□ 0
SMG6-215ENST00000574501 C1QTNF12Q5T7M4 302 aa15.06■□□□□ 0
SMG6-215ENST00000574501 TXNRD3NBQ6F5E7 133 aa15.06■□□□□ 0
SMG6-215ENST00000574501 TPTE2Q6XPS3 522 aa15.06■□□□□ 0
SMG6-215ENST00000574501 MON1BQ7L1V2 547 aa15.06■□□□□ 0
SMG6-215ENST00000574501 METTL25Q8N6Q8 603 aa15.06■□□□□ 0
SMG6-215ENST00000574501 CPT1BQ92523 772 aa15.06■□□□□ 0
SMG6-215ENST00000574501 SHCBP1LQ9BZQ2 653 aa15.06■□□□□ 0
SMG6-215ENST00000574501 IQCGQ9H095 443 aaKnown RBP15.06■□□□□ 0
SMG6-215ENST00000574501 PKD2L1Q9P0L9 805 aa15.06■□□□□ 0
SMG6-215ENST00000574501 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
SMG6-215ENST00000574501 IKBKGQ9Y6K9 419 aa15.06■□□□□ 0
SMG6-215ENST00000574501 IVNS1ABPQ9Y6Y0 642 aa15.06■□□□□ 0
SMG6-215ENST00000574501 CYB561D2O14569 222 aa15.05■□□□□ 0
SMG6-215ENST00000574501 SLC16A4O15374 487 aa15.05■□□□□ 0
SMG6-215ENST00000574501 TFAP2AP05549 437 aa15.05■□□□□ 0
SMG6-215ENST00000574501 CDK4P11802 303 aa15.05■□□□□ 0
SMG6-215ENST00000574501 RPL7AP62424 266 aaKnown RBP15.05■□□□□ 0
SMG6-215ENST00000574501 CCNIQ14094 377 aa15.05■□□□□ 0
SMG6-215ENST00000574501 NADK2Q4G0N4 442 aa15.05■□□□□ 0
SMG6-215ENST00000574501 AAGABQ6PD74 315 aa15.05■□□□□ 0
SMG6-215ENST00000574501 KYAT3Q6YP21 454 aaKnown RBP15.05■□□□□ 0
SMG6-215ENST00000574501 IGDCC3Q8IVU1 814 aa15.05■□□□□ 0
SMG6-215ENST00000574501 CEP70Q8NHQ1 597 aa15.05■□□□□ 0
SMG6-215ENST00000574501 MKL1Q969V6 931 aa15.05■□□□□ 0
SMG6-215ENST00000574501 SRPK1Q96SB4 655 aaKnown RBP15.05■□□□□ 0
SMG6-215ENST00000574501 GRIP2Q9C0E4 1043 aa15.05■□□□□ 0
SMG6-215ENST00000574501 C20orf27Q9GZN8 174 aa15.05■□□□□ 0
SMG6-215ENST00000574501 SOX13Q9UN79 622 aa15.05■□□□□ 0
SMG6-215ENST00000574501 KAT6AQ92794 2004 aa15.05■□□□□ 0
SMG6-215ENST00000574501 IQANK1A0A1B0GTG1 560 aa15.05■□□□□ -0
SMG6-215ENST00000574501 CAPN8A6NHC0 703 aa15.05■□□□□ -0
SMG6-215ENST00000574501 KCNQ2O43526 872 aa15.05■□□□□ -0
SMG6-215ENST00000574501 CLPTM1O96005 669 aa15.05■□□□□ -0
SMG6-215ENST00000574501 CFBP00751 764 aa15.05■□□□□ -0
SMG6-215ENST00000574501 ZNF200P98182 395 aaPredicted RBP15.05■□□□□ -0
SMG6-215ENST00000574501 CHI3L2Q15782 390 aa15.05■□□□□ -0
SMG6-215ENST00000574501 KBTBD12Q3ZCT8 623 aa15.05■□□□□ -0
SMG6-215ENST00000574501 KLC3Q6P597 504 aa15.05■□□□□ -0
SMG6-215ENST00000574501 PAOXQ6QHF9 649 aa15.05■□□□□ -0
SMG6-215ENST00000574501 HAUS6Q7Z4H7 955 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms