RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 IGSF9Q9P2J2 1179 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 CDH9Q9ULB4 789 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 CTNND2Q9UQB3 1225 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 ZFP37Q9Y6Q3 630 aaPredicted RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 DMXL1Q9Y485 3027 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 CFAP54Q96N23 3096 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 GOLGA6L4A6NEF3 574 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 TNFRSF10BO14763 440 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 ECI2O75521 394 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 KIF20AO95235 890 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 SMC2O95347 1197 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 SRFP11831 508 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 PTPN2P17706 415 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 GTF2H1P32780 548 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 MXI1P50539 228 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 CYP4F8P98187 520 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 MYL7Q01449 175 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 SMARCB1Q12824 385 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 ORC1Q13415 861 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 CAMK4Q16566 473 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 NFE2Q16621 373 aaPredicted RBP9.27□□□□□ -0.93
SMG6-210ENST00000572205 DPCR1Q3MIW9 517 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 TANGO2Q6ICL3 276 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 VITQ6UXI7 678 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 METTL23Q86XA0 190 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 TRIM59Q8IWR1 403 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 UBALD2Q8IYN6 164 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 FUKQ8N0W3 1084 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 LEMD2Q8NC56 503 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
SMG6-210ENST00000572205 DHTKD1Q96HY7 919 aaPredicted RBP9.27□□□□□ -0.93
SMG6-210ENST00000572205 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
SMG6-210ENST00000572205 KXD1Q9BQD3 176 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 DDX23Q9BUQ8 820 aaKnown RBP9.27□□□□□ -0.93
SMG6-210ENST00000572205 TTLL2Q9BWV7 592 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 B3GNT5Q9BYG0 378 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 ASAH2Q9NR71 780 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 GDE1Q9NZC3 331 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 METRNQ9UJH8 293 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 FRMD4BQ9Y2L6 1034 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 MRPS23Q9Y3D9 190 aaKnown RBP9.27□□□□□ -0.93
SMG6-210ENST00000572205 ASB3Q9Y575 518 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 PCDHB5Q9Y5E4 795 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 MUC22E2RYF6 1773 aaPredicted RBP9.27□□□□□ -0.93
SMG6-210ENST00000572205 PIEZO1Q92508 2521 aa9.27□□□□□ -0.93
SMG6-210ENST00000572205 CACNA1IQ9P0X4 2223 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 FAM92AA1XBS5 289 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 HHLA1C9JL84 531 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 CLDN5O00501 218 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 PMM2O15305 246 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 CILPO75339 1184 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 GABBR2O75899 941 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 BEST1O76090 585 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 OLFM2O95897 454 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 NUDT7P0C024 238 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 RPL13P26373 211 aaKnown RBP9.26□□□□□ -0.93
SMG6-210ENST00000572205 PCSK1P29120 753 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 WEE1P30291 646 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 ELF1P32519 619 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 PIK3CAP42336 1068 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 PGFP49763 221 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 NLRP12P59046 1061 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 ZXDBP98169 803 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 FKBP3Q00688 224 aaKnown RBP9.26□□□□□ -0.93
SMG6-210ENST00000572205 TSPY1Q01534 308 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 PLD1Q13393 1074 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 BIRC3Q13489 604 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 DDR2Q16832 855 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 MGAT5BQ3V5L5 792 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 ZNF667Q5HYK9 610 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 MDH1BQ5I0G3 518 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 DPY19L2P1Q6NXN4 242 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 PDZD4Q76G19 769 aaPredicted RBP9.26□□□□□ -0.93
SMG6-210ENST00000572205 FAM35AQ86V20 835 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 DCP1BQ8IZD4 617 aaKnown RBP9.26□□□□□ -0.93
SMG6-210ENST00000572205 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 GIPC2Q8TF65 315 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 TAF4BQ92750 862 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 NXPE3Q969Y0 559 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 ELSPBP1Q96BH3 223 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 MCRS1Q96EZ8 462 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 SPATA17Q96L03 361 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 SLC22A12Q96S37 553 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 ELOVL4Q9GZR5 314 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 NIF3L1Q9GZT8 377 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 CSNK1G1Q9HCP0 422 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 PRM3Q9NNZ6 103 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 IL37Q9NZH6 218 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 DLGAP2Q9P1A6 1054 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 NXF1Q9UBU9 619 aaKnown RBP9.26□□□□□ -0.93
SMG6-210ENST00000572205 MYOFQ9NZM1 2061 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 DNAH14Q0VDD8 3507 aa9.26□□□□□ -0.93
SMG6-210ENST00000572205 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms