RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 USP17L7P0C7H9 530 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 DRD1P21728 446 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 WARSP23381 471 aaKnown RBP18.79■□□□□ 0.6
CIITA-206ENST00000571190 RAP1GAPP47736 663 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 USP46P62068 366 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 MYO1EQ12965 1108 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 DUOXA2Q1HG44 320 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 EML3Q32P44 896 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 ZNF507Q8TCN5 953 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 MYLPFQ96A32 169 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 SPATA17Q96L03 361 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 LINC00597Q9H2U6 94 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 DUS2Q9NX74 493 aaKnown RBP18.79■□□□□ 0.6
CIITA-206ENST00000571190 TFIP11Q9UBB9 837 aaKnown RBP18.79■□□□□ 0.6
CIITA-206ENST00000571190 CDH9Q9ULB4 789 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 SLC8A2Q9UPR5 921 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 ANK1P16157 1881 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 TRAV19A0A0A6YYK7 116 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 RPP40O75818 363 aaKnown RBP18.78■□□□□ 0.6
CIITA-206ENST00000571190 CKMP06732 381 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 PDGFRBP09619 1106 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 TCF3P15923 654 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 BDNFP23560 247 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 AMPD2Q01433 879 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 SF3A2Q15428 464 aaKnown RBP18.78■□□□□ 0.6
CIITA-206ENST00000571190 CCDC6Q16204 474 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 TRAPPC11Q7Z392 1133 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 WDR49Q8IV35 697 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 CPA6Q8N4T0 437 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 SH3RF2Q8TEC5 729 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 MRPL45Q9BRJ2 306 aaKnown RBP18.78■□□□□ 0.6
CIITA-206ENST00000571190 GZF1Q9H116 711 aaPredicted RBP18.78■□□□□ 0.6
CIITA-206ENST00000571190 ARRDC1-AS1Q9H2J1 176 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 RXFP3Q9NSD7 469 aa18.78■□□□□ 0.6
CIITA-206ENST00000571190 MAGEC2Q9UBF1 373 aaPredicted RBP18.78■□□□□ 0.6
CIITA-206ENST00000571190 NUP210Q8TEM1 1887 aaPredicted RBP18.77■□□□□ 0.6
CIITA-206ENST00000571190 ANTXRLA6NF34 631 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 SPTLC2O15270 562 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 TNNC2P02585 160 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 ADRB1P08588 477 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 EHHADHQ08426 723 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 STK38Q15208 465 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 SURF1Q15526 300 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 CNNM4Q6P4Q7 775 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 SHC4Q6S5L8 630 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 VSTM1Q6UX27 236 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 C4orf50Q6ZRC1 276 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 CACNA2D4Q7Z3S7 1137 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 CAMKK1Q8N5S9 505 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 RDH13Q8NBN7 331 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 TTC16Q8NEE8 873 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 CD101Q93033 1021 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 PCED1BQ96HM7 432 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 LOXL4Q96JB6 756 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 HHIPQ96QV1 700 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 AGPAT3Q9NRZ7 376 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 TMEM30AQ9NV96 361 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 ARHGAP26Q9UNA1 814 aa18.77■□□□□ 0.6
CIITA-206ENST00000571190 EIF3DO15371 548 aaKnown RBP eCLIP18.76■□□□□ 0.59
CIITA-206ENST00000571190 PPP6R2O75170 966 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 EPN2O95208 641 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 HDCP19113 662 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 IFNAR2P48551 515 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 CACNA2D1P54289 1103 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 GAB4Q2WGN9 574 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 FBXO43Q4G163 708 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 PPM1JQ5JR12 505 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 STXBP4Q6ZWJ1 553 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 FSIP1Q8NA03 581 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 RPLP0P6Q8NHW5 317 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 MYCBPAPQ8TBZ2 947 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 ZNF516Q92618 1163 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 ATP2A3Q93084 1043 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 DHX58Q96C10 678 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 TTLL2Q9BWV7 592 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 CUEDC2Q9H467 287 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 KIAA1586Q9HCI6 787 aa18.76■□□□□ 0.59
CIITA-206ENST00000571190 KIF26AQ9ULI4 1882 aaPredicted RBP18.75■□□□□ 0.59
CIITA-206ENST00000571190 TM4SF5O14894 197 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 CLIC2O15247 247 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 AKAP3O75969 853 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 ZNF806P0C7X5 589 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 CASP1P29466 404 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 GRIK1P39086 918 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 OPRD1P41143 372 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 ASIC1P78348 528 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 CYP27A1Q02318 531 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 KCNB1Q14721 858 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 PSMD6Q15008 389 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 SNRNP35Q16560 246 aaKnown RBP18.75■□□□□ 0.59
CIITA-206ENST00000571190 PLA2G2CQ5R387 149 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 FAM26FQ5R3K3 315 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 DENND5BQ6ZUT9 1274 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 SYT13Q7L8C5 426 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 SCFD1Q8WVM8 642 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 ZC3H10Q96K80 434 aaKnown RBP18.75■□□□□ 0.59
CIITA-206ENST00000571190 CEP295NLQ96MC4 621 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 MMS19Q96T76 1030 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 C7orf25Q9BPX7 421 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 LRRC27Q9C0I9 530 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms