RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CCDC43Q96MW1 224 aaKnown RBP7.8□□□□□ -1.16
SMG6-205ENST00000570659 RNF38Q9H0F5 515 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 TOPORSQ9NS56 1045 aaPredicted RBP7.8□□□□□ -1.16
SMG6-205ENST00000570659 TMEM30AQ9NV96 361 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 DKK4Q9UBT3 224 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 DNMT3LQ9UJW3 386 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 MYLKQ15746 1914 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 NUMA1Q14980 2115 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 ANO9A1A5B4 782 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 CBX4O00257 560 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 PIRO00625 290 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 KCNK3O14649 394 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 MAP3K13O43283 966 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 NEMFO60524 1076 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 JAK2O60674 1132 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 CYP11A1P05108 521 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 HMGB1P09429 215 aaKnown RBP7.79□□□□□ -1.16
SMG6-205ENST00000570659 NDUFV2P19404 249 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 TYMPP19971 482 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 CDC25AP30304 524 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 MCM7P33993 719 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 EFNA5P52803 228 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 FAM160A1Q05DH4 1040 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 AAMPQ13685 434 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 KRT32Q14532 448 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 ZNF268Q14587 947 aaPredicted RBP7.79□□□□□ -1.16
SMG6-205ENST00000570659 DUOXA1Q1HG43 343 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 KCNT1Q5JUK3 1230 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 C9orf57Q5W0N0 161 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 RHBDF2Q6PJF5 856 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 LAYNQ6UX15 382 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 FILIP1Q7Z7B0 1213 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 TRIM22Q8IYM9 498 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 HDDC3Q8N4P3 179 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 C4orf32Q8N8J7 132 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 NECAB1Q8N987 351 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 WHAMMQ8TF30 809 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 YTHDC1Q96MU7 727 aaKnown RBP7.79□□□□□ -1.16
SMG6-205ENST00000570659 NACC1Q96RE7 527 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 UBL7Q96S82 380 aaPredicted RBP7.79□□□□□ -1.16
SMG6-205ENST00000570659 MRPL4Q9BYD3 311 aaKnown RBP7.79□□□□□ -1.16
SMG6-205ENST00000570659 PRDM16Q9HAZ2 1276 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 TUFT1Q9NNX1 390 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 CYP8B1Q9UNU6 501 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 NME7Q9Y5B8 376 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 RAD54BQ9Y620 910 aa7.79□□□□□ -1.16
SMG6-205ENST00000570659 PIEZO2Q9H5I5 2752 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 EIF4E1BA6NMX2 242 aaKnown RBP7.78□□□□□ -1.16
SMG6-205ENST00000570659 PLK4O00444 970 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 ATP2C2O75185 946 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 NOL4O94818 638 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 KAT7O95251 611 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 BAG4O95429 457 aaKnown RBP7.78□□□□□ -1.16
SMG6-205ENST00000570659 ADRB2P07550 413 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 MAPTP10636 758 aaKnown RBP7.78□□□□□ -1.16
SMG6-205ENST00000570659 RPA1P27694 616 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 IFNAR2P48551 515 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 PGFP49763 221 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 CACNA2D1P54289 1103 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 MCL1Q07820 350 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 NOLC1Q14978 699 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG6-205ENST00000570659 DHCR24Q15392 516 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 BMP2KLQ5H9B9 411 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 SPATA1Q5VX52 437 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 EGFLAMQ63HQ2 1017 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 C1orf186Q6ZWK4 172 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 RUFY3Q7L099 469 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 GLRX5Q86SX6 157 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 ZNF605Q86T29 641 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 USP37Q86T82 979 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 ITIH5Q86UX2 942 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 NAT16Q8N8M0 369 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 TMEM161BQ8NDZ6 487 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 TCHPQ9BT92 498 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 MMTAG2Q9BU76 263 aaKnown RBP7.78□□□□□ -1.16
SMG6-205ENST00000570659 TMEM134Q9H6X4 195 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 CAAP1Q9H8G2 361 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 DDX19AQ9NUU7 478 aaKnown RBP7.78□□□□□ -1.16
SMG6-205ENST00000570659 SMPD4Q9NXE4 827 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 MYH11P35749 1972 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 TP53BP1Q12888 1972 aaPredicted RBP7.78□□□□□ -1.16
SMG6-205ENST00000570659 SPTA1P02549 2419 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 STK36Q9NRP7 1315 aa7.78□□□□□ -1.16
SMG6-205ENST00000570659 KCNJ18B7U540 433 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 WASH3PC4AMC7 463 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 LEFTY2O00292 366 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 CKMP06732 381 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 KRT2P35908 639 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 ATXN3P54252 364 aaPredicted RBP7.77□□□□□ -1.17
SMG6-205ENST00000570659 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
SMG6-205ENST00000570659 GUCY1B3Q02153 619 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 PPP2R5AQ15172 486 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 PTPAQ15257 358 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 ZNF174Q15697 407 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 PLEKHG6Q3KR16 790 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 CCDC157Q569K6 752 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 RINT1Q6NUQ1 792 aa7.77□□□□□ -1.17
SMG6-205ENST00000570659 CC2D1AQ6P1N0 951 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms