RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 FAM186AA6NE01 2351 aa24.08■■□□□ 1.44
RBFOX1-219ENST00000569895 TRIM66O15016 1216 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 ACTN4O43707 911 aaKnown RBP24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 STAU1O95793 577 aaKnown RBP24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 BDNFP23560 247 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 PDE6CP51160 858 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 FOXK2Q01167 660 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 FAM160A1Q05DH4 1040 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 PDGFRLQ15198 375 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 TXNDC11Q6PKC3 985 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 KIAA2013Q8IYS2 634 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 GPR161Q8N6U8 529 aaKnown RBP24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 RBM12Q9NTZ6 932 aaKnown RBP24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 ATP6V1DQ9Y5K8 247 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 PATJQ8NI35 1801 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 F5P12259 2224 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 COL4A2P08572 1712 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 CFAP54Q96N23 3096 aa24.07■■□□□ 1.44
RBFOX1-219ENST00000569895 GRSF1Q12849 480 aaKnown RBP eCLIP24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 CCDC142Q17RM4 750 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 KMT5BQ4FZB7 885 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 DENND5BQ6ZUT9 1274 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 ZNF516Q92618 1163 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 CCDC47Q96A33 483 aaKnown RBP24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 PCED1BQ96HM7 432 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 MRPL45Q9BRJ2 306 aaKnown RBP24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 EBF3Q9H4W6 596 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 RAB23Q9ULC3 237 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 NUP210Q8TEM1 1887 aaPredicted RBP24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 DMDP11532 3685 aa24.06■■□□□ 1.44
RBFOX1-219ENST00000569895 A0A1B0GVL5 298 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 KLRC4O43908 158 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 KIF20AO95235 890 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 CKMP06732 381 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 TDGF1P13385 188 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 PFKFB1P16118 471 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 PFKLP17858 780 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 PPP3CCP48454 512 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 MYL6P60660 151 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 SATB1Q01826 763 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 STK4Q13043 487 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 BIRC3Q13489 604 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 KCNB1Q14721 858 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 SLC9A9Q8IVB4 645 aa24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 NXF1Q9UBU9 619 aaKnown RBP24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 SMG5Q9UPR3 1016 aaKnown RBP24.05■■□□□ 1.44
RBFOX1-219ENST00000569895 TADA3O75528 432 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 CLSTN1O94985 981 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 PAPSS2O95340 614 aaPredicted RBP24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 PTPN1P18031 435 aaKnown RBP24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 HDCP19113 662 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 CCINQ13939 588 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 GAS6Q14393 721 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 MDH1BQ5I0G3 518 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 DCLK2Q8N568 766 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 TMEM174Q8WUU8 243 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 CYP2S1Q96SQ9 504 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 HPS4Q9NQG7 708 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 TRPM5Q9NZQ8 1165 aa24.04■■□□□ 1.44
RBFOX1-219ENST00000569895 FANCMQ8IYD8 2048 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 A8MXQ7 604 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 PDXKO00764 312 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 SYKP43405 635 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 MTF1Q14872 753 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 TRIM68Q6AZZ1 485 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 ERMP1Q7Z2K6 904 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 CPA6Q8N4T0 437 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 KIAA0895Q8NCT3 520 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 PARD3BQ8TEW8 1205 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 C8orf48Q96LL4 319 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 ELOVL4Q9GZR5 314 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 VRTNQ9H8Y1 702 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 DMAC2Q9NW81 257 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 DUS2Q9NX74 493 aaKnown RBP24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 GMEB2Q9UKD1 530 aa24.03■■□□□ 1.44
RBFOX1-219ENST00000569895 TRDMT1O14717 391 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 ATG13O75143 517 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 CNR2P34972 360 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 NOP14P78316 857 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 CLDN10P78369 228 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 NR1H3Q13133 447 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 ZNF667Q5HYK9 610 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 TMEM196Q5HYL7 178 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 ARL14EPQ8N8R7 260 aaPredicted RBP24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 TTC16Q8NEE8 873 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 OSCP1Q8WVF1 389 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 SCAND2PQ9GZW5 306 aaPredicted RBP24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 XYLT2Q9H1B5 865 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 HPSEQ9Y251 543 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 FRMD4BQ9Y2L6 1034 aa24.02■■□□□ 1.44
RBFOX1-219ENST00000569895 F8VP50 259 aa24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 CALUO43852 315 aaPredicted RBP24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 RPN1P04843 607 aaKnown RBP24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 P4HA1P13674 534 aa24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 IFNAR2P48551 515 aa24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 CASP4P49662 377 aa24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 NCOA4Q13772 614 aa24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 ZNF699Q32M78 642 aa24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 TDRD10Q5VZ19 366 aaKnown RBP24.01■■□□□ 1.43
RBFOX1-219ENST00000569895 Q6ZS52 159 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms