RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 HES6Q96HZ4 224 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 SUSD3Q96L08 255 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 SYT15Q9BQS2 421 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 COLEC11Q9BWP8 271 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 TTYH1Q9H313 450 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 ABCB6Q9NP58 842 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 FAM49BQ9NUQ9 324 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 DDX43Q9NXZ2 648 aaKnown RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 IP6K2Q9UHH9 426 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 CDH9Q9ULB4 789 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 ALG6Q9Y672 507 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 SLC4A7Q9Y6M7 1214 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 CCDC66A2RUB6 948 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 SIGLEC16A6NMB1 481 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 EFCAB8A8MWE9 144 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 KCNK3O14649 394 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CTIFO43310 598 aaKnown RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 SRGAP2O75044 1071 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 PROSCO94903 275 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CYP11A1P05108 521 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 DESP17661 470 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 PTPN1P18031 435 aaKnown RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 COMTP21964 271 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 LMO2P25791 158 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 ADORA2BP29275 332 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 MAN1A1P33908 653 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 ACADSBP45954 432 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 GABRB2P47870 512 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 OR1G1P47890 313 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 DNA2P51530 1060 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 EPHB4P54760 987 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 SMAD3P84022 425 aaKnown RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 SHHQ15465 462 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 MAPRE1Q15691 268 aaKnown RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 PTPN20Q4JDL3 420 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 OSTM1Q86WC4 334 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 ZDHHC17Q8IUH5 632 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 LRRC43Q8N309 656 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 C12orf29Q8N999 325 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 UBA3Q8TBC4 463 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 ATXN2LQ8WWM7 1075 aaKnown RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 UBXN4Q92575 508 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 GOLGA1Q92805 767 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CAPZA3Q96KX2 299 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 RNPC3Q96LT9 517 aaKnown RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 UHRF1Q96T88 793 aaPredicted RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 HNRNPABQ99729 332 aaKnown RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 PAAF1Q9BRP4 392 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 TMEM175Q9BSA9 504 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 MED10Q9BTT4 135 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 PLVAPQ9BX97 442 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 GOLPH3Q9H4A6 298 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 DPEP3Q9H4B8 488 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 ST7Q9NRC1 585 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CACNG4Q9UBN1 327 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 PCDHB8Q9UN66 801 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 PACSIN2Q9UNF0 486 aaPredicted RBP8.06□□□□□ -1.12
CDH13-214ENST00000569455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDH13-214ENST00000569455 NME7Q9Y5B8 376 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CHD9Q3L8U1 2897 aa8.06□□□□□ -1.12
CDH13-214ENST00000569455 CACNA1AO00555 2505 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 COL4A6Q14031 1691 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.05□□□□□ -1.12
CDH13-214ENST00000569455 TMEM191CA6NGB0 347 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 TBKBP1A7MCY6 615 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 GOLGA8SH3BPF8 625 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 SYN3O14994 580 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 TADA2AO75478 443 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 TADA3O75528 432 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 DDHD2O94830 711 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 ERBB2P04626 1255 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 ALDH2P05091 517 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 ACRP10323 421 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 KRT3P12035 628 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 CCDC130P13994 396 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
CDH13-214ENST00000569455 ACAT1P24752 427 aaKnown RBP8.05□□□□□ -1.12
CDH13-214ENST00000569455 CTNNA2P26232 953 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 BRCC3P46736 316 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 WDR5P61964 334 aaKnown RBP8.05□□□□□ -1.12
CDH13-214ENST00000569455 TSPY1Q01534 308 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 PLCB3Q01970 1234 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 ITIH3Q06033 890 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 PDE4CQ08493 712 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 ELAVL2Q12926 359 aaKnown RBP8.05□□□□□ -1.12
CDH13-214ENST00000569455 PIGHQ14442 188 aaPredicted RBP8.05□□□□□ -1.12
CDH13-214ENST00000569455 RAB30Q15771 203 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 PAN2Q504Q3 1202 aaKnown RBP8.05□□□□□ -1.12
CDH13-214ENST00000569455 PKDCCQ504Y2 493 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 C2CD6Q53TS8 623 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 MDH1BQ5I0G3 518 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 CYP4A22Q5TCH4 519 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 CCDC70Q6NSX1 233 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 OTOP2Q7RTS6 562 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 PHLDB2Q86SQ0 1253 aa8.05□□□□□ -1.12
CDH13-214ENST00000569455 TTC30AQ86WT1 665 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms