RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 CCDC175P0C221 793 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 KRT9P35527 623 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 RAP1GAPP47736 663 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 EPHB3P54753 998 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 CDH8P55286 799 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 MARSP56192 900 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 PSMC1P62191 440 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 NTHL1P78549 312 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 MAPRE1Q15691 268 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 VWA3BQ502W6 1294 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 FKBP15Q5T1M5 1219 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 GET4Q7L5D6 327 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 TTC9BQ8N6N2 239 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 PKMYT1Q99640 499 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 DNMT3BQ9UBC3 853 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 MYBPHLA2RUH7 354 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 C2CD4DB7Z1M9 353 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 ATP2C2O75185 946 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 FSHRP23945 695 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 GBP2P32456 591 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 ASPAP45381 313 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 FMO5P49326 533 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 RAD9BQ6WBX8 426 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 SPATA2LQ8IUW3 424 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 CORO1BQ9BR76 489 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 NIF3L1Q9GZT8 377 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 APOBEC3GQ9HC16 384 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 ABCB6Q9NP58 842 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 CRTAC1Q9NQ79 661 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■□ 25.1
NSMCE1-214ENST00000569236 CEP72Q9P209 647 aa13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 LUC7L2Q9Y383 392 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-214ENST00000569236 A0A1W2PQJ5 194 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 N4BP1O75113 896 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 LRRN2O75325 713 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 SOAT2O75908 522 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 RHOP08100 348 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 HAPLN1P10915 354 aaPredicted RBP13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 CETN1Q12798 172 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 SYCP1Q15431 976 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 CFAP221Q4G0U5 840 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 CYP4A22Q5TCH4 519 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 TRIM59Q8IWR1 403 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 OR8K1Q8NGG5 319 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 MYCBPAPQ8TBZ2 947 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 ZNF592Q92610 1267 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 FUBP3Q96I24 572 aaKnown RBP eCLIP13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 SDCBP2Q9H190 292 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 ASAH2Q9NR71 780 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 COQ4Q9Y3A0 265 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 NME7Q9Y5B8 376 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 ADGRG1Q9Y653 693 aa13.34□□□□□ -0.27
NSMCE1-214ENST00000569236 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 PTPN1P18031 435 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 CYP2F1P24903 491 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 CYP27A1Q02318 531 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 MTF1Q14872 753 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 VEPH1Q14D04 833 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 MEA1Q16626 185 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 PDZD4Q76G19 769 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 ITIH5Q86UX2 942 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 ZDHHC14Q8IZN3 488 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 B3GALNT2Q8NCR0 500 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 MYLPFQ96A32 169 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 TNIP3Q96KP6 325 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 BCO2Q9BYV7 579 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 DPEP3Q9H4B8 488 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 CYP3A43Q9HB55 503 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 MRPS23Q9Y3D9 190 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 ASB3Q9Y575 518 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 NOTCH4Q99466 2003 aa13.33□□□□□ -0.28
NSMCE1-214ENST00000569236 PMM2O15305 246 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 ATF6P18850 670 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 KCNH2Q12809 1159 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 TAF12Q16514 161 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 MDH1BQ5I0G3 518 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 UNC93AQ86WB7 457 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 LEMD2Q8NC56 503 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 PSMG2Q969U7 264 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 FAXDC2Q96IV6 333 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 DESI2Q9BSY9 194 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 SIK3Q9Y2K2 1263 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 ZNF197O14709 1029 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 P4HA2O15460 535 aa13.32□□□□□ -0.28
NSMCE1-214ENST00000569236 AFPP02771 609 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms