RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SLC22A12Q96S37 553 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 TTLL2Q9BWV7 592 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 CHRDQ9H2X0 955 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 HMGXB4Q9UGU5 601 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 ZMYM5Q9UJ78 669 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 MYO16Q9Y6X6 1858 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 OTOL1A6NHN0 477 aaPredicted RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 SOBPA7XYQ1 873 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 F8VP50 259 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 MAN2B1O00754 1011 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 OLFM2O95897 454 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 ASS1P00966 412 aaKnown RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 PDGFRBP09619 1106 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 TRIM49P0CI25 452 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 TRIM49CP0CI26 452 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 CHRNB1P11230 501 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 BDNFP23560 247 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 NR2F2P24468 414 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 ASPAP45381 313 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 RAP1GAPP47736 663 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 AP3M2P53677 418 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 TNNC1P63316 161 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 NOP14P78316 857 aaKnown RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 ENPEPQ07075 957 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 TNK2Q07912 1038 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 BIRC3Q13489 604 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 GAS6Q14393 721 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 ZNF268Q14587 947 aaPredicted RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 MAPRE1Q15691 268 aaKnown RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 ZNF77Q15935 545 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 ZNF699Q32M78 642 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 ARHGAP29Q52LW3 1261 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 MDH1BQ5I0G3 518 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 C4orf50Q6ZRC1 276 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 SV2AQ7L0J3 742 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 MON1AQ86VX9 555 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 SCN4BQ8IWT1 228 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 ZC3H3Q8IXZ2 948 aaKnown RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 SMYD4Q8IYR2 804 aaPredicted RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 MAB21L3Q8N8X9 362 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 B3GALNT2Q8NCR0 500 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 SPATA20Q8TB22 786 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 MSANTD3Q96H12 275 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 CEP295NLQ96MC4 621 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 MMS19Q96T76 1030 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 NELL2Q99435 816 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 FAM83CQ9BQN1 747 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 BCO2Q9BYV7 579 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 ZNF518BQ9C0D4 1074 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 KIF9Q9HAQ2 790 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 HPS4Q9NQG7 708 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 GTSE1Q9NYZ3 720 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 GCNT4Q9P109 453 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 UXTQ9UBK9 157 aaPredicted RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 MAGED2Q9UNF1 606 aaPredicted RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 MAPK8IP1Q9UQF2 711 aa8.35□□□□□ -1.07
CDH3-209ENST00000569080 R3HCC1Q9Y3T6 440 aaKnown RBP8.35□□□□□ -1.07
CDH3-209ENST00000569080 C2orf78A6NCI8 922 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 SPECC1L-ADORA2AF8WAN1 911 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 CLDN5O00501 218 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 IKBKBO14920 756 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 CALUO43852 315 aaPredicted RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 TCF3P15923 654 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 PTPN1P18031 435 aaKnown RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 CCNE1P24864 410 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 GNL1P36915 607 aaPredicted RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 CDH8P55286 799 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 NUCB2P80303 420 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 ZXDBP98169 803 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 PLCB2Q00722 1185 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 CYP27A1Q02318 531 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 PPP3CAQ08209 521 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 MTAPQ13126 283 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 TRPC3Q13507 836 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 PNOCQ13519 176 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 BECN1Q14457 450 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 TAF12Q16514 161 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 EDRF1Q3B7T1 1238 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 ZNF528Q3MIS6 628 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 COBLL1Q53SF7 1204 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 CEP135Q66GS9 1140 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 SPOPLQ6IQ16 392 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 SCARA5Q6ZMJ2 495 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 MAMSTRQ6ZN01 415 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 PAQR9Q6ZVX9 377 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 FAM35AQ86V20 835 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 OR6B3Q8NGW1 331 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 FAM3CQ92520 227 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 MRPS31Q92665 395 aaKnown RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 C8orf48Q96LL4 319 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 B3GNT5Q9BYG0 378 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 ELOVL4Q9GZR5 314 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 C8orf33Q9H7E9 229 aaPredicted RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 APOBEC3GQ9HC16 384 aaKnown RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 TDP1Q9NUW8 608 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 SPATA6Q9NWH7 488 aaPredicted RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms