RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 POTEDQ86YR6 584 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 TMEM130Q8N3G9 435 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 BSNDQ8WZ55 320 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 MRPS31Q92665 395 aaKnown RBP12.19□□□□□ -0.46
CDH3-208ENST00000569036 CCDC43Q96MW1 224 aaKnown RBP12.19□□□□□ -0.46
CDH3-208ENST00000569036 LGMNQ99538 433 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 CCDC94Q9BW85 323 aaPredicted RBP12.19□□□□□ -0.46
CDH3-208ENST00000569036 ANKEF1Q9NU02 776 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 CNTN3Q9P232 1028 aa12.19□□□□□ -0.46
CDH3-208ENST00000569036 HEMK1Q9Y5R4 338 aaPredicted RBP12.19□□□□□ -0.46
CDH3-208ENST00000569036 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 ANAPC1Q9H1A4 1944 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 SGSM2O43147 1006 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 NDUFS2O75306 463 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 ZNF217O75362 1048 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 SLITRK3O94933 977 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 KAT7O95251 611 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 LYPLA2O95372 231 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 HMGA1P17096 107 aaKnown RBP12.18□□□□□ -0.46
CDH3-208ENST00000569036 CHMLP26374 656 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 HSPA4P34932 840 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 ACTN2P35609 894 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 TUFMP49411 452 aaKnown RBP12.18□□□□□ -0.46
CDH3-208ENST00000569036 UCNP55089 124 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 TARDBPQ13148 414 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDH3-208ENST00000569036 C4orf17Q53FE4 359 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 OVOS1Q6IE37 1185 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 IL27RAQ6UWB1 636 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 FOXJ1Q92949 421 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 SLC22A12Q96S37 553 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 C22orf23Q9BZE7 217 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 CD93Q9NPY3 652 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
CDH3-208ENST00000569036 CHMP5Q9NZZ3 219 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 TUBGCP4Q9UGJ1 667 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 PAXBP1Q9Y5B6 917 aa12.18□□□□□ -0.46
CDH3-208ENST00000569036 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 GOLGA6L3A6NEY3 463 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 MEI4A8MW99 385 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 SLC27A2O14975 620 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 PRPF3O43395 683 aaKnown RBP12.17□□□□□ -0.46
CDH3-208ENST00000569036 TADA3O75528 432 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 APODP05090 189 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 NDUFV2P19404 249 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 GRK6P43250 576 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 SLC6A11P48066 632 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 AARSP49588 968 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDH3-208ENST00000569036 NFATC3Q12968 1075 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 SUZ12Q15022 739 aaKnown RBP12.17□□□□□ -0.46
CDH3-208ENST00000569036 TBC1D25Q3MII6 688 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 SLC39A12Q504Y0 691 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 BROXQ5VW32 411 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 APBB1IPQ7Z5R6 666 aaPredicted RBP12.17□□□□□ -0.46
CDH3-208ENST00000569036 SH3RF2Q8TEC5 729 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 DNASE2BQ8WZ79 361 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 HAS1Q92839 578 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 NAF1Q96HR8 494 aaKnown RBP12.17□□□□□ -0.46
CDH3-208ENST00000569036 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 PNKPQ96T60 521 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 FAM117AQ9C073 453 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 CDT1Q9H211 546 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 TMEM206Q9H813 350 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 ITPR2Q14571 2701 aa12.17□□□□□ -0.46
CDH3-208ENST00000569036 TLN1Q9Y490 2541 aaKnown RBP12.16□□□□□ -0.46
CDH3-208ENST00000569036 MYMKA6NI61 221 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 TRIM66O15016 1216 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 CYP17A1P05093 508 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 GSPT1P15170 499 aaKnown RBP12.16□□□□□ -0.46
CDH3-208ENST00000569036 CLCN1P35523 988 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 RCAN1P53805 252 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 KDSRQ06136 332 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 DMP1Q13316 513 aaPredicted RBP12.16□□□□□ -0.46
CDH3-208ENST00000569036 SERINC3Q13530 473 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 UBAP2LQ14157 1087 aaKnown RBP12.16□□□□□ -0.46
CDH3-208ENST00000569036 ZC2HC1CQ53FD0 456 aaPredicted RBP12.16□□□□□ -0.46
CDH3-208ENST00000569036 C6orf132Q5T0Z8 1188 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 USP49Q70CQ1 688 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 STKLD1Q8NE28 680 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 ENGASEQ8NFI3 743 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 OR10T2Q8NGX3 314 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 CYP2S1Q96SQ9 504 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 KIFC3Q9BVG8 833 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 MIR1-1HGQ9H1L0 117 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 TRPC7Q9HCX4 862 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 FTSJ1Q9UET6 329 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
CDH3-208ENST00000569036 A0A087WWV3 80 aa12.15□□□□□ -0.46
CDH3-208ENST00000569036 A0A0A0MRY4 1105 aa12.15□□□□□ -0.46
CDH3-208ENST00000569036 TRAV19A0A0A6YYK7 116 aa12.15□□□□□ -0.46
CDH3-208ENST00000569036 A0A1W2PQF6 199 aa12.15□□□□□ -0.46
CDH3-208ENST00000569036 M0R2N6 131 aa12.15□□□□□ -0.46
CDH3-208ENST00000569036 CKMP06732 381 aa12.15□□□□□ -0.46
CDH3-208ENST00000569036 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms