RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 CCDC39Q9UFE4 941 aa12.94□□□□□ -0.34
FANCA-232ENST00000568983 RALYQ9UKM9 306 aaKnown RBP12.94□□□□□ -0.34
FANCA-232ENST00000568983 ITGA11Q9UKX5 1188 aa12.94□□□□□ -0.34
FANCA-232ENST00000568983 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
FANCA-232ENST00000568983 CFAP47Q6ZTR5 3102 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 LDHAP00338 332 aaKnown RBP12.93□□□□□ -0.34
FANCA-232ENST00000568983 HDCP19113 662 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 ANXA13P27216 316 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 ADSSP30520 456 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 TXLNAP40222 546 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 LHX1P48742 406 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 DHPSP49366 369 aaPredicted RBP12.93□□□□□ -0.34
FANCA-232ENST00000568983 GRIN1Q05586 938 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 MYO1EQ12965 1108 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 RABEP1Q15276 862 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 UAP1L1Q3KQV9 507 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
FANCA-232ENST00000568983 PMS2CLQ68D20 193 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 BRSK2Q8IWQ3 736 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 LRRC52Q8N7C0 313 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 C1orf127Q8N9H9 656 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 SPACA7Q96KW9 195 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 MYRFLQ96LU7 910 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 MTMR12Q9C0I1 747 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
FANCA-232ENST00000568983 SEL1LQ9UBV2 794 aa12.93□□□□□ -0.34
FANCA-232ENST00000568983 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
FANCA-232ENST00000568983 GOLGA8IPA6NC78 632 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 GOLGA8JA6NMD2 632 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 C1QTNF9BB2RNN3 333 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 GIPC1O14908 333 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 ALDH1A2O94788 518 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 PROS1P07225 676 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 C1QTNF9P0C862 333 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 IDEP14735 1019 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 GAP43P17677 238 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 GRIK1P39086 918 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
FANCA-232ENST00000568983 RBP5P82980 135 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 CYP27A1Q02318 531 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 KCNA1Q09470 495 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 SF3A1Q15459 793 aaKnown RBP12.92□□□□□ -0.34
FANCA-232ENST00000568983 LARP1BQ659C4 914 aaKnown RBP12.92□□□□□ -0.34
FANCA-232ENST00000568983 CCDC33Q8N5R6 958 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 TOP6BLQ8N6T0 577 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 PIGKQ92643 395 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
FANCA-232ENST00000568983 FUBP3Q96I24 572 aaKnown RBP eCLIP12.92□□□□□ -0.34
FANCA-232ENST00000568983 ANKRD36BP1Q96IX9 119 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 TMX3Q96JJ7 454 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 SYT15Q9BQS2 421 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
FANCA-232ENST00000568983 STK17AQ9UEE5 414 aa12.92□□□□□ -0.34
FANCA-232ENST00000568983 MAP3K13O43283 966 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 HCRTO43612 131 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 ABL1P00519 1130 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 WNT7BP56706 349 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
FANCA-232ENST00000568983 DENND5BQ6ZUT9 1274 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 ARMCX6Q7L4S7 300 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 OSTM1Q86WC4 334 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 ZSWIM2Q8NEG5 633 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 MDGA1Q8NFP4 955 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 SPATA18Q8TC71 538 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 MYLPFQ96A32 169 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 EPSTI1Q96J88 318 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
FANCA-232ENST00000568983 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 PCIF1Q9H4Z3 704 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 PDE11AQ9HCR9 933 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 GDAP2Q9NXN4 497 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 EHD2Q9NZN4 543 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 TRPM5Q9NZQ8 1165 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 MMP17Q9ULZ9 603 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 ARHGAP26Q9UNA1 814 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.91□□□□□ -0.34
FANCA-232ENST00000568983 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 LAMA1P25391 3075 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 NUP205Q92621 2012 aa12.91□□□□□ -0.34
FANCA-232ENST00000568983 THADAQ6YHU6 1953 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 CEP295Q9C0D2 2601 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 VPS37CA5D8V6 355 aaPredicted RBP12.9□□□□□ -0.34
FANCA-232ENST00000568983 MYMKA6NI61 221 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 PATE3B3GLJ2 98 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 LEFTY2O00292 366 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 PPP1R37O75864 691 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 CLSTN1O94985 981 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 TNNC2P02585 160 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 SPINK2P20155 84 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 BCKDHBP21953 392 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 GARTP22102 1010 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 BDNFP23560 247 aa12.9□□□□□ -0.34
FANCA-232ENST00000568983 MAGEA11P43364 429 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms