RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 HEATR6Q6AI08 1181 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 SCARA5Q6ZMJ2 495 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 C4orf50Q6ZRC1 276 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 RALGPS2Q86X27 583 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 ARL14EPQ8N8R7 260 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 SUMF1Q8NBK3 374 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 PCED1BQ96HM7 432 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 SEMA4AQ9H3S1 761 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 SMYD3Q9H7B4 428 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 HPS4Q9NQG7 708 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 PRMT8Q9NR22 394 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 TDP1Q9NUW8 608 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 ZSCAN32Q9NX65 697 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 OBP2AQ9NY56 170 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 MAPK8IP1Q9UQF2 711 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 COL4A2P08572 1712 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 A8MXQ7 604 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 CLDN5O00501 218 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 ABL1P00519 1130 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 RPN1P04843 607 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 CKMP06732 381 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 PTPN1P18031 435 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 WEE1P30291 646 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 SYKP43405 635 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 CXCL12P48061 93 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 SNRPFP62306 86 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 RUNX3Q13761 415 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 TDRD10Q5VZ19 366 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 CEP135Q66GS9 1140 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 CC2D1AQ6P1N0 951 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 C12orf56Q8IXR9 622 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 ZBTB44Q8NCP5 570 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 MYCBPAPQ8TBZ2 947 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 SPATA18Q8TC71 538 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 FUBP3Q96I24 572 aaKnown RBP eCLIP13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 FAM83CQ9BQN1 747 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 ZNF518BQ9C0D4 1074 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 XYLT2Q9H1B5 865 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 POLR3BQ9NW08 1133 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 HPSEQ9Y251 543 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 PCDHGA2Q9Y5H1 932 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 WNT6Q9Y6F9 365 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 SDK1Q7Z5N4 2213 aa13.05□□□□□ -0.32
GTF3C1-208ENST00000567843 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 CHURC1-FNTBB4DL54 471 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 F8VP50 259 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 SCAMP3O14828 347 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 TACC1O75410 805 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 TDGF1P13385 188 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 DDX6P26196 483 aaKnown RBP eCLIP13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 ANXA13P27216 316 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 MAGEA11P43364 429 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 FNTBP49356 437 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 CCR3P51677 355 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 SRSF5Q13243 272 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 ORC1Q13415 861 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 LRRC32Q14392 662 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 ZNF699Q32M78 642 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 PKN3Q6P5Z2 889 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 GOLGA5Q8TBA6 731 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 PARD3BQ8TEW8 1205 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 RUBCNQ92622 972 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 CHFRQ96EP1 664 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 TRMT2BQ96GJ1 504 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 MYRFLQ96LU7 910 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 SDCBP2Q9H190 292 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 FBRSL1Q9HCM7 1045 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 TMEM30AQ9NV96 361 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 NCDNQ9UBB6 729 aa13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 UXTQ9UBK9 157 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-208ENST00000567843 VNN1O95497 513 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 C4BPAP04003 597 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 NR3C1P04150 777 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 HDCP19113 662 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 ID4P47928 161 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 PXNP49023 591 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 MLLT6P55198 1093 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 PSMD2Q13200 908 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 NCOA4Q13772 614 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 MTF1Q14872 753 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 PRR23BQ6ZRT6 265 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 DENND5BQ6ZUT9 1274 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 SH3RF2Q8TEC5 729 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 NELL1Q92832 810 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 SYAP1Q96A49 352 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 MSANTD3Q96H12 275 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 MED10Q9BTT4 135 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 LINC00597Q9H2U6 94 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 KCTD10Q9H3F6 313 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms