RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 AGO2Q9UKV8 859 aaKnown RBP14.39□□□□□ -0.11
COMMD4-214ENST00000566230 DMXL2Q8TDJ6 3036 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 TNRC6BQ9UPQ9 1833 aaKnown RBP14.38□□□□□ -0.11
COMMD4-214ENST00000566230 PATE3B3GLJ2 98 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 CDX4O14627 284 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-214ENST00000566230 BCKDHBP21953 392 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 GBP1P32455 592 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 TXLNAP40222 546 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 TSPY1Q01534 308 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 GRIN1Q05586 938 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 FAM160A1Q05DH4 1040 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 ZNF252P-AS1Q0IIN9 211 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 FOXC1Q12948 553 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 USP4Q13107 963 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 PSMD2Q13200 908 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 PKP1Q13835 747 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 NFE2Q16621 373 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-214ENST00000566230 CCDC142Q17RM4 750 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 SV2CQ496J9 727 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 SH3PXD2AQ5TCZ1 1133 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 FOXD4L5Q5VV16 416 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-214ENST00000566230 DAB2IPQ5VWQ8 1189 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 LEO1Q8WVC0 666 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-214ENST00000566230 FOXD4L4Q8WXT5 416 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-214ENST00000566230 ACDQ96AP0 544 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 TRMT2BQ96GJ1 504 aaKnown RBP14.38□□□□□ -0.11
COMMD4-214ENST00000566230 ZHX3Q9H4I2 956 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 TMEM206Q9H813 350 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 GCNT4Q9P109 453 aa14.38□□□□□ -0.11
COMMD4-214ENST00000566230 NBEAQ8NFP9 2946 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 K7EQS6 105 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 USP17L7P0C7H9 530 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 HOXB3P14651 431 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ACAT1P24752 427 aaKnown RBP14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ADSSP30520 456 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 OPRD1P41143 372 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 IFNAR2P48551 515 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 RPL10AP62906 217 aaKnown RBP14.37□□□□□ -0.11
COMMD4-214ENST00000566230 IRX4P78413 519 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 POU5F1Q01860 360 aaKnown RBP14.37□□□□□ -0.11
COMMD4-214ENST00000566230 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 SLFN12LQ6IEE8 588 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 RASSF3Q86WH2 238 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ARL14EPQ8N8R7 260 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-214ENST00000566230 TTC16Q8NEE8 873 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ZSWIM2Q8NEG5 633 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 RASSF8Q8NHQ8 419 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 RAD54LQ92698 747 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ATP2A3Q93084 1043 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 EXOC4Q96A65 974 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 CLIC6Q96NY7 704 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ACBD6Q9BR61 282 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 TPSD1Q9BZJ3 242 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ST6GALNAC4Q9H4F1 302 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 TRPC7Q9HCX4 862 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ABCB6Q9NP58 842 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 UXTQ9UBK9 157 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-214ENST00000566230 RCOR1Q9UKL0 485 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 GTF3C4Q9UKN8 822 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 L1RE1Q9UN81 338 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 ZDHHC9Q9Y397 364 aa14.37□□□□□ -0.11
COMMD4-214ENST00000566230 TRAV19A0A0A6YYK7 116 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 C2orf78A6NCI8 922 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 KHNYNO15037 678 aaKnown RBP14.36□□□□□ -0.11
COMMD4-214ENST00000566230 HCRTO43612 131 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 CUTAO60888 179 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 KRT18P05783 430 aaKnown RBP14.36□□□□□ -0.11
COMMD4-214ENST00000566230 CKMP06732 381 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 PLCG1P19174 1290 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 CSRP1P21291 193 aaKnown RBP14.36□□□□□ -0.11
COMMD4-214ENST00000566230 POLR2BP30876 1174 aaKnown RBP14.36□□□□□ -0.11
COMMD4-214ENST00000566230 NUCB2P80303 420 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 USP39Q53GS9 565 aaKnown RBP14.36□□□□□ -0.11
COMMD4-214ENST00000566230 C2orf27AQ580R0 203 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
COMMD4-214ENST00000566230 OSTM1Q86WC4 334 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 TSTD1Q8NFU3 115 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 CXorf38Q8TB03 319 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 SH3RF2Q8TEC5 729 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 FAM84AQ96KN4 292 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 ZNF560Q96MR9 790 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 TMEM9BQ9NQ34 198 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 DDX43Q9NXZ2 648 aaKnown RBP14.36□□□□□ -0.11
COMMD4-214ENST00000566230 AGAP1Q9UPQ3 857 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 CEP192Q8TEP8 1941 aa14.36□□□□□ -0.11
COMMD4-214ENST00000566230 ITPR1Q14643 2758 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 ADAMTS9Q9P2N4 1935 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 PLXND1Q9Y4D7 1925 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
COMMD4-214ENST00000566230 IL18RAPO95256 599 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 CEACAM1P13688 526 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 HNRNPLP14866 589 aaKnown RBP eCLIP14.35□□□□□ -0.11
COMMD4-214ENST00000566230 TCF3P15923 654 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 ABCD1P33897 745 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 PNPLA4P41247 253 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 SEC13P55735 322 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 ZXDBP98169 803 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms