RNA–Protein interactions for RNA: ENST00000565821.1

CYCSP39-201, Transcript of cytochrome c, somatic pseudogene 39, humanhuman

BASIC

Gene CYCSP39, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP39-201ENST00000565821 MSL3Q8N5Y2 521 aaKnown RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 ANKRD53Q8N9V6 530 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 REPS2Q8NFH8 660 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 OR7D4Q8NG98 312 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 NSUN6Q8TEA1 469 aaKnown RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 LRTOMTQ8WZ04 291 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 LPIN2Q92539 896 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 LPPQ93052 612 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 SLC35A4Q96G79 324 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 LCORQ96JN0 433 aaPredicted RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 NEUROD6Q96NK8 337 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 PPP1R16BQ96T49 567 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 PDCD2LQ9BRP1 358 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 LRFN3Q9BTN0 628 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 API5Q9BZZ5 524 aaKnown RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 NUP62CLQ9H1M0 184 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 ZBTB40Q9NUA8 1239 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 RTEL1Q9NZ71 1219 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 ABCF2Q9UG63 623 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 PUF60Q9UHX1 559 aaKnown RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 FEZ2Q9UHY8 353 aaPredicted RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 CPA4Q9UI42 421 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 AJAP1Q9UKB5 411 aaPredicted RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 PHTF1Q9UMS5 762 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 L1RE1Q9UN81 338 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 SMG5Q9UPR3 1016 aaKnown RBP3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 DAAM1Q9Y4D1 1078 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 SNX13Q9Y5W8 968 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 TRPM7Q96QT4 1865 aa3.55□□□□□ -1.84
CYCSP39-201ENST00000565821 CACNA1FO60840 1977 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 MYO5AQ9Y4I1 1855 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 RFX7Q2KHR2 1363 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 PAPPA2Q9BXP8 1791 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CYP2D7A0A087X1C5 515 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 A0A088AWK7 358 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 LOC102724159A0A0B4J2E5 919 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 A0A1B0GTL3 188 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 NRP1O14786 923 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 ADCY6O43306 1168 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SURF6O75683 361 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 EIF3JO75822 258 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 GASTP01350 101 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 GNAI2P04899 355 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 JUNP05412 331 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 RAP2AP10114 183 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CYP2D6P10635 497 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CSF2RBP32927 897 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CRHR1P34998 444 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SREBF1P36956 1147 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 IL15P40933 162 aaPredicted RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CASRP41180 1078 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SLC6A9P48067 706 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CTCFP49711 727 aaPredicted RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 AFF3P51826 1226 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 WNT3AP56704 352 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 RAB1AP62820 205 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 TARDBPQ13148 414 aaKnown RBP eCLIP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 RAB39AQ14964 217 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 ACAP1Q15027 740 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 PWP2Q15269 919 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 LONRF1Q17RB8 773 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 VMACQ2NL98 169 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 AGBL4Q5VU57 503 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 MAEAQ7L5Y9 396 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SRLQ86TD4 932 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SMC5Q8IY18 1101 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CARFQ8N187 725 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 TXNDC5Q8NBS9 432 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 MDM1Q8TC05 714 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 ADAMTS17Q8TE56 1095 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SH3RF3Q8TEJ3 882 aaPredicted RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 BRI3BPQ8WY22 251 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 ABHD8Q96I13 439 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 AJUBAQ96IF1 538 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 FAM167AQ96KS9 214 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 STRBPQ96SI9 672 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 KATNBL1Q9H079 304 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SLC6A15Q9H2J7 730 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 BHMT2Q9H2M3 363 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 C12orf65Q9H3J6 166 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 DNAJC18Q9H819 358 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SARS2Q9NP81 518 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 NLRC4Q9NPP4 1024 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 SLAMF7Q9NQ25 335 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 USP40Q9NVE5 1235 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 PNPOQ9NVS9 261 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CALCOCO1Q9P1Z2 691 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 TRPS1Q9UHF7 1281 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 RUVBL1Q9Y265 456 aaKnown RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 NR2E1Q9Y466 385 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 CTDP1Q9Y5B0 961 aaPredicted RBP3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 FPGT-TNNI3KV9GXZ4 949 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 OTOFQ9HC10 1997 aa3.54□□□□□ -1.84
CYCSP39-201ENST00000565821 A0A0C4DFX4 3053 aa3.53□□□□□ -1.84
CYCSP39-201ENST00000565821 GAKO14976 1311 aa3.53□□□□□ -1.84
CYCSP39-201ENST00000565821 AKAP11Q9UKA4 1901 aa3.53□□□□□ -1.84
CYCSP39-201ENST00000565821 RHPN2P1A8MT19 583 aa3.53□□□□□ -1.84
CYCSP39-201ENST00000565821 PHGDHO43175 533 aaKnown RBP3.53□□□□□ -1.84
CYCSP39-201ENST00000565821 TEX33O43247 280 aa3.53□□□□□ -1.84
CYCSP39-201ENST00000565821 PRKAB2O43741 272 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms