RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 XYLT2Q9H1B5 865 aa21.24■□□□□ 0.99
CLN6-206ENST00000565471 SNX25Q9H3E2 840 aa21.24■□□□□ 0.99
CLN6-206ENST00000565471 DMAC2Q9NW81 257 aa21.24■□□□□ 0.99
CLN6-206ENST00000565471 GVINP1Q7Z2Y8 2422 aa21.24■□□□□ 0.99
CLN6-206ENST00000565471 PTPRDP23468 1912 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 CFAP54Q96N23 3096 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 ZNF638Q14966 1978 aaKnown RBP21.23■□□□□ 0.99
CLN6-206ENST00000565471 PDGFRBP09619 1106 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 BDNFP23560 247 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 NRLP54845 237 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 MYL6P60660 151 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 CLDN10P78369 228 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 SPEM1Q8N4L4 309 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 FSIP1Q8NA03 581 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 TTC8Q8TAM2 541 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 PARD3BQ8TEW8 1205 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 RUBCNQ92622 972 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 PCED1BQ96HM7 432 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 KCTD10Q9H3F6 313 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 VRTNQ9H8Y1 702 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 GKN1Q9NS71 199 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 ATP6V1DQ9Y5K8 247 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 GREB1Q4ZG55 1949 aa21.23■□□□□ 0.99
CLN6-206ENST00000565471 PDXKO00764 312 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 TRIM66O15016 1216 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 GRIK1P39086 918 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 CYP27A1Q02318 531 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 FAM160A1Q05DH4 1040 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 RUNX3Q13761 415 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 GAS6Q14393 721 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 WDR44Q5JSH3 913 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 CC2D1AQ6P1N0 951 aaPredicted RBP21.22■□□□□ 0.99
CLN6-206ENST00000565471 SYNPOQ8N3V7 929 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 OR6B3Q8NGW1 331 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 PLEKHO2Q8TD55 490 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 SCAND2PQ9GZW5 306 aaPredicted RBP21.22■□□□□ 0.99
CLN6-206ENST00000565471 EPC1Q9H2F5 836 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 HPS4Q9NQG7 708 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 EHD2Q9NZN4 543 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 NME7Q9Y5B8 376 aa21.22■□□□□ 0.99
CLN6-206ENST00000565471 TRAV19A0A0A6YYK7 116 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 PHACTR2O75167 634 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 PAPSS2O95340 614 aaPredicted RBP21.21■□□□□ 0.99
CLN6-206ENST00000565471 USP17L7P0C7H9 530 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 ANXA13P27216 316 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 SYKP43405 635 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 CXCL12P48061 93 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 CASP4P49662 377 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 CCINQ13939 588 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 PON2Q15165 354 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 MDH1BQ5I0G3 518 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 TDRD10Q5VZ19 366 aaKnown RBP21.21■□□□□ 0.99
CLN6-206ENST00000565471 DENND5BQ6ZUT9 1274 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 CHAMP1Q96JM3 812 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 C8orf48Q96LL4 319 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 TRPC7Q9HCX4 862 aa21.21■□□□□ 0.99
CLN6-206ENST00000565471 RBM12Q9NTZ6 932 aaKnown RBP21.21■□□□□ 0.99
CLN6-206ENST00000565471 ANAPC1Q9H1A4 1944 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 OTOGLQ3ZCN5 2332 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 LRRIQ3A6PVS8 624 aaPredicted RBP21.2■□□□□ 0.98
CLN6-206ENST00000565471 RPN1P04843 607 aaKnown RBP21.2■□□□□ 0.98
CLN6-206ENST00000565471 PFKLP17858 780 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 PTPN1P18031 435 aaKnown RBP21.2■□□□□ 0.98
CLN6-206ENST00000565471 PDE6CP51160 858 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 SATB1Q01826 763 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 BIRC3Q13489 604 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 PDGFRLQ15198 375 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 RIN3Q8TB24 985 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 SLC22A12Q96S37 553 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 HINFPQ9BQA5 517 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 TTLL2Q9BWV7 592 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 ELOVL4Q9GZR5 314 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 EBF3Q9H4W6 596 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 GCNT4Q9P109 453 aa21.2■□□□□ 0.98
CLN6-206ENST00000565471 NXF1Q9UBU9 619 aaKnown RBP21.2■□□□□ 0.98
CLN6-206ENST00000565471 A0A1W2PQ27 194 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 A0A1W2PQ64 194 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 A0A1W2PQD8 194 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 A8MXQ7 604 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 KIF20AO95235 890 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 C4BPAP04003 597 aaKnown RBP21.19■□□□□ 0.98
CLN6-206ENST00000565471 NR3C1P04150 777 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 CKMP06732 381 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 TCF3P15923 654 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 NDUFA8P51970 172 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 NOP14P78316 857 aaKnown RBP21.19■□□□□ 0.98
CLN6-206ENST00000565471 AMPD2Q01433 879 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 USP4Q13107 963 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 MTF1Q14872 753 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 ZNF77Q15935 545 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 ZNF699Q32M78 642 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 TRIM68Q6AZZ1 485 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 Q6ZS52 159 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 TMC2Q8TDI7 906 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 CCDC47Q96A33 483 aaKnown RBP21.19■□□□□ 0.98
CLN6-206ENST00000565471 DPEP3Q9H4B8 488 aa21.19■□□□□ 0.98
CLN6-206ENST00000565471 EP300Q09472 2414 aaPredicted RBP21.19■□□□□ 0.98
CLN6-206ENST00000565471 F8VP50 259 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 RHOBTB3O94955 611 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms