RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 DBF4BQ8NFT6 615 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 EXD1Q8NHP7 514 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 CCDC26Q8TAB7 109 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 HSFY1Q96LI6 401 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 DSEQ9UL01 958 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 BRCA2P51587 3418 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 TULP2O00295 520 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 ZRANB2O95218 330 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLN6-205ENST00000564846 PARNO95453 639 aaKnown RBP20.59■□□□□ 0.89
CLN6-205ENST00000564846 CYP11A1P05108 521 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 ACADSBP45954 432 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 CLLU1OSQ5K130 101 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 DAB2IPQ5VWQ8 1189 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 MAATS1Q7Z4T9 603 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 DDX47Q9H0S4 455 aaKnown RBP20.59■□□□□ 0.89
CLN6-205ENST00000564846 CDH9Q9ULB4 789 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 DCDC2CA8MYV0 355 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 M0QZQ0 153 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 ENPP3O14638 875 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 RAD51CO43502 376 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 ATP2C2O75185 946 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 ACAT1P24752 427 aaKnown RBP20.59■□□□□ 0.89
CLN6-205ENST00000564846 PCSK1P29120 753 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 PLA2G4AP47712 749 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 ATN1P54259 1190 aaPredicted RBP20.59■□□□□ 0.89
CLN6-205ENST00000564846 SLC7A5Q01650 507 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 DSC1Q08554 894 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 MAP9Q49MG5 647 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 OLFML1Q6UWY5 402 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 CD300LGQ6UXG3 332 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 CCNI2Q6ZMN8 369 aaPredicted RBP20.59■□□□□ 0.89
CLN6-205ENST00000564846 METTL23Q86XA0 190 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 IFT20Q8IY31 132 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 FUKQ8N0W3 1084 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 EMC1Q8N766 993 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 MAIP1Q8WWC4 291 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 TOX2Q96NM4 488 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 SYT15Q9BQS2 421 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 DUSP16Q9BY84 665 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 NR2E1Q9Y466 385 aa20.59■□□□□ 0.89
CLN6-205ENST00000564846 FSCN2O14926 492 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 XPO1O14980 1071 aaKnown RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 HEXIM1O94992 359 aaKnown RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 TNFRSF8P28908 595 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 TKTP29401 623 aaKnown RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 CETN2P41208 172 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 MNX1P50219 401 aaPredicted RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 ZNF143P52747 638 aaPredicted RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 MRPS25P82663 173 aaKnown RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 SLC6A3Q01959 620 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 PLCB3Q01970 1234 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 C1orf53Q5VUE5 145 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 POLNQ7Z5Q5 900 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 ADAT2Q7Z6V5 191 aaKnown RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 CTU1Q7Z7A3 348 aaKnown RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 RSPH1Q8WYR4 309 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 ZNF333Q96JL9 665 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 HIPK3Q9H422 1215 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.58■□□□□ 0.89
CLN6-205ENST00000564846 ZNF446Q9NWS9 450 aa20.58■□□□□ 0.89
CLN6-205ENST00000564846 DDX56Q9NY93 547 aaKnown RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 TIMM13Q9Y5L4 95 aaPredicted RBP20.58■□□□□ 0.89
CLN6-205ENST00000564846 PIK3R2O00459 728 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 PHF2O75151 1096 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 ZMYND10O75800 440 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 SCNN1AP37088 669 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 HADHQ16836 314 aaKnown RBP20.57■□□□□ 0.88
CLN6-205ENST00000564846 MDH1BQ5I0G3 518 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 RCOR2Q8IZ40 523 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 RBM41Q96IZ5 413 aaKnown RBP20.57■□□□□ 0.88
CLN6-205ENST00000564846 SUSD3Q96L08 255 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 CNPY3Q9BT09 278 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 ASNSD1Q9NWL6 643 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 PCDHB7Q9Y5E2 793 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 TDRD15B5MCY1 1934 aaKnown RBP20.57■□□□□ 0.88
CLN6-205ENST00000564846 C2CD4BA6NLJ0 364 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 PAPSS1O43252 624 aaPredicted RBP20.57■□□□□ 0.88
CLN6-205ENST00000564846 ATP8B1O43520 1251 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 LRCH4O75427 683 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 RNF8O76064 485 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 GLI1P08151 1106 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 NPR3P17342 541 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 GPD1P21695 349 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 CHRNA3P32297 505 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 BRCC3P46736 316 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 CYP1B1Q16678 543 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 PAN2Q504Q3 1202 aaKnown RBP20.57■□□□□ 0.88
CLN6-205ENST00000564846 BEND6Q5SZJ8 279 aaPredicted RBP20.57■□□□□ 0.88
CLN6-205ENST00000564846 KIAA0319Q5VV43 1072 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 FBXO46Q6PJ61 603 aaPredicted RBP20.57■□□□□ 0.88
CLN6-205ENST00000564846 CCDC50Q8IVM0 306 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 SCUBE3Q8IX30 993 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 PRELID2Q8N945 189 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 ACBD6Q9BR61 282 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 CRTAC1Q9NQ79 661 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 GDF3Q9NR23 364 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 TBC1D13Q9NVG8 400 aa20.57■□□□□ 0.88
CLN6-205ENST00000564846 TMEM189-UBE2V1I3L0A0 370 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 GABBR2O75899 941 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 DDHD2O94830 711 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms