RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CCDC97Q96F63 343 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 PCYT2Q99447 389 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 NUF2Q9BZD4 464 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SLC39A8Q9C0K1 460 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FAM204AQ9H8W3 233 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 NYAP2Q9P242 653 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FAM169AQ9Y6X4 670 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ARHGAP42A6NI28 874 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ECEL1O95672 775 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 LDOC1O95751 146 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 MYL7Q01449 175 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FLOT2Q14254 428 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 STYK1Q6J9G0 422 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 AFG1LQ8WV93 481 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 KREMEN1Q96MU8 473 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 OSMRQ99650 979 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 INTS2Q9H0H0 1204 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 C2orf40Q9H1Z8 148 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 TSPYL2Q9H2G4 693 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 ZNF229Q9UJW7 825 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SSC5DA1L4H1 1573 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 PSMD3O43242 534 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 MSCO60682 206 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 EPHX2P34913 555 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ARL4AP40617 200 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 PIK3CAP42336 1068 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ALDH1A3P47895 512 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 LIG4P49917 911 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 RAD51Q06609 339 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 BRD3Q15059 726 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SNRNP35Q16560 246 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 LONRF1Q17RB8 773 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 EFCAB12Q6NXP0 572 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FASTKD5Q7L8L6 764 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 NOP9Q86U38 636 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 ARHGAP18Q8N392 663 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 GDAP1Q8TB36 358 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 RNF34Q969K3 372 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 C7orf25Q9BPX7 421 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 RSPH14Q9UHP6 348 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ADGRA2Q96PE1 1338 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 KPNA6O60684 536 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 GJB3O75712 270 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 AFPP02771 609 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 SOX11P35716 441 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FXR2P51116 673 aaKnown RBP eCLIP3.51□□□□□ -1.851e-6■■■■□ 20.1
CHD9-213ENST00000564845 HK2P52789 917 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 TMEM119Q4V9L6 283 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 CENPPQ6IPU0 288 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 C1orf228Q6PIY5 440 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SETD3Q86TU7 594 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 SCUBE3Q8IX30 993 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 LMNTD2Q8IXW0 634 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 NLRP7Q8WX94 980 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SLC35C1Q96A29 364 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FAR2Q96K12 515 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 HOXC10Q9NYD6 342 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 RBPJLQ9UBG7 517 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 CAPN11Q9UMQ6 739 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 AGTPBP1Q9UPW5 1226 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SNX24Q9Y343 169 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 NUB1Q9Y5A7 615 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SNX10Q9Y5X0 201 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 H3BMM5 538 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FGGP02679 453 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 OR4Q2P0C623 313 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 TXNP10599 105 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 STAT1P42224 750 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ARPP19P56211 112 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 PDCLQ13371 301 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 EFTUD2Q15029 972 aaKnown RBP eCLIP3.51□□□□□ -1.854e-7■■■■□ 24.8
CHD9-213ENST00000564845 PTPRRQ15256 657 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ADRM1Q16186 407 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 P3H1Q32P28 736 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 CC2D1AQ6P1N0 951 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 HDXQ7Z353 690 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 AGR3Q8TD06 166 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 TMEM40Q8WWA1 233 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ASZ1Q8WWH4 475 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 VPS33AQ96AX1 596 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ZFP42Q96MM3 310 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 RETREG1Q9H6L5 497 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 APOBEC3GQ9HC16 384 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 PLAGL2Q9UPG8 496 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 MAST2Q6P0Q8 1798 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 BRCA1P38398 1863 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 ACSL3O95573 720 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 VAMP7P51809 220 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FKBP1BP68106 108 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 MAPRE1Q15691 268 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 WDR72Q3MJ13 1102 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 C1orf220Q5T0J3 134 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 INTS8Q75QN2 995 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 IRF2BP2Q7Z5L9 587 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ANKMY2Q8IV38 441 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 GIMAP4Q9NUV9 329 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 GOLGA8KD6RF30 607 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 P4HA2O15460 535 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ICAM1P05362 532 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CD19P15391 556 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms