RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CYP3A43Q9HB55 503 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 ANO10Q9NW15 660 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PCDHB5Q9Y5E4 795 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 CLUHO75153 1309 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 NOTCH4Q99466 2003 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 NCOR1O75376 2440 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 A8MXQ7 604 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PDGFRBP09619 1106 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PTPN2P17706 415 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PTPN1P18031 435 aaKnown RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PTMSP20962 102 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 RAP1GAPP47736 663 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PSMC1P62191 440 aaKnown RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 NTHL1P78549 312 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 MAPRE1Q15691 268 aaKnown RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 STX1AQ16623 288 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PRSS36Q5K4E3 855 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 SASS6Q6UVJ0 657 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 C11orf57Q6ZUT1 292 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 B3GALNT2Q8NCR0 500 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PSMG2Q969U7 264 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PCED1BQ96HM7 432 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 FUCA2Q9BTY2 467 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 SNX25Q9H3E2 840 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 DPEP3Q9H4B8 488 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 PIDD1Q9HB75 910 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 EVA1BQ9NVM1 165 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 HCFC1R1Q9NWW0 138 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 ABI2Q9NYB9 513 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.6□□□□□ -1.35
CNOT1-204ENST00000563130 DOCK6Q96HP0 2047 aa6.6□□□□□ -1.35
CNOT1-204ENST00000563130 C2CD4DB7Z1M9 353 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 CILPO75339 1184 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 SOAT2O75908 522 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 MICAL2O94851 1124 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 AFPP02771 609 aaKnown RBP6.59□□□□□ -1.35
CNOT1-204ENST00000563130 RHOP08100 348 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 CYP2F1P24903 491 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 MAGEA11P43364 429 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 TYRO3Q06418 890 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 PLD1Q13393 1074 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 SLC5A9Q2M3M2 681 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 MGAT5BQ3V5L5 792 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 PABPC1LQ4VXU2 614 aaKnown RBP6.59□□□□□ -1.35
CNOT1-204ENST00000563130 CDKAL1Q5VV42 579 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 SCARA5Q6ZMJ2 495 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 C4orf50Q6ZRC1 276 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 PAQR9Q6ZVX9 377 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 TMC8Q8IU68 726 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 ZDHHC14Q8IZN3 488 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 UBR7Q8N806 425 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 CCDC150Q8NCX0 1101 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 MYLPFQ96A32 169 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 RPGRIP1Q96KN7 1286 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 TWNKQ96RR1 684 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 LPIN3Q9BQK8 851 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 SAMSN1Q9NSI8 373 aaKnown RBP6.59□□□□□ -1.35
CNOT1-204ENST00000563130 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.59□□□□□ -1.353e-9■■■□□ 18
CNOT1-204ENST00000563130 HMGXB4Q9UGU5 601 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 NFE2L3Q9Y4A8 694 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 ASB3Q9Y575 518 aa6.59□□□□□ -1.35
CNOT1-204ENST00000563130 GTPBP10A4D1E9 387 aaKnown RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 NRG2O14511 850 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 MOSPD3O75425 235 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 HMGA1P17096 107 aaKnown RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 CCR2P41597 374 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 ALDH1A3P47895 512 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 CDR1P51861 262 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 NDST1P52848 882 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 EPHB3P54753 998 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 CETN1Q12798 172 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 NCAPHQ15003 741 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 MDH1BQ5I0G3 518 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 WDR44Q5JSH3 913 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 MIIPQ5JXC2 388 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 VSTM1Q6UX27 236 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 OTOP3Q7RTS5 596 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 DNAJB7Q7Z6W7 309 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 SPATA2LQ8IUW3 424 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 FAM114A1Q8IWE2 563 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 TTC39CQ8N584 583 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 LEMD2Q8NC56 503 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 EHBP1Q8NDI1 1231 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 TNIP3Q96KP6 325 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 CEP295NLQ96MC4 621 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF512Q96ME7 567 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 MYADMQ96S97 322 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 SEPT5Q99719 369 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 HSD3B7Q9H2F3 369 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 TMEM30AQ9NV96 361 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 EPS15L1Q9UBC2 864 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 NR2E1Q9Y466 385 aa6.59□□□□□ -1.36
CNOT1-204ENST00000563130 ZFP37Q9Y6Q3 630 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-204ENST00000563130 DOCK8Q8NF50 2099 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 LAMP2P13473 410 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 FSHRP23945 695 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 EEF1GP26641 437 aaKnown RBP6.58□□□□□ -1.36
CNOT1-204ENST00000563130 GPR15P49685 360 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 RPL10AP62906 217 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms