RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 ATP2C2O75185 946 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 USP17L7P0C7H9 530 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 TCF3P15923 654 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 CMA1P23946 247 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 CASP1P29466 404 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 HOXA6P31267 233 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 CNR2P34972 360 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 GNL1P36915 607 aaPredicted RBP14□□□□□ -0.17
AC009055.1-201ENST00000562656 PDE6CP51160 858 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 CLDN10P78369 228 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 TNK2Q07912 1038 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 TRPC3Q13507 836 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 PON2Q15165 354 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 WDR72Q3MJ13 1102 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 SLC9A9Q8IVB4 645 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 SCN4BQ8IWT1 228 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 MYLPFQ96A32 169 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
AC009055.1-201ENST00000562656 EXOC4Q96A65 974 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 SNX25Q9H3E2 840 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 VRTNQ9H8Y1 702 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 CRTAC1Q9NQ79 661 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 NCDNQ9UBB6 729 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 SERTAD1Q9UHV2 236 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 SMG5Q9UPR3 1016 aaKnown RBP14□□□□□ -0.17
AC009055.1-201ENST00000562656 CCL26Q9Y258 94 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 ANAPC1Q9H1A4 1944 aa14□□□□□ -0.17
AC009055.1-201ENST00000562656 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 ANXA13P27216 316 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 GRIK1P39086 918 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 PPP3CCP48454 512 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 PSMC1P62191 440 aaKnown RBP13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 TNNC1P63316 161 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 SATB1Q01826 763 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 CYP27A1Q02318 531 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 CCDC142Q17RM4 750 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 WDR44Q5JSH3 913 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 DENND5BQ6ZUT9 1274 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 KIAA2013Q8IYS2 634 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 KIAA1958Q8N8K9 716 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 STKLD1Q8NE28 680 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 TTC8Q8TAM2 541 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 ZNF516Q92618 1163 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 PAGE5Q96GU1 130 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 PCED1BQ96HM7 432 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 C8orf48Q96LL4 319 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 HPS4Q9NQG7 708 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 RBM12Q9NTZ6 932 aaKnown RBP13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 EXOC1Q9NV70 894 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 DMAC2Q9NW81 257 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 GCNT4Q9P109 453 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 HPSEQ9Y251 543 aa13.99□□□□□ -0.17
AC009055.1-201ENST00000562656 K7ESF4 209 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 ATG13O75143 517 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 CKMP06732 381 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 BDNFP23560 247 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 NOP14P78316 857 aaKnown RBP13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 KRT85P78386 507 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 GRSF1Q12849 480 aaKnown RBP eCLIP13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 STK4Q13043 487 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 MTF1Q14872 753 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 ZNF77Q15935 545 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 TMEM196Q5HYL7 178 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 LONP2Q86WA8 852 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 DCLK2Q8N568 766 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 OR6B3Q8NGW1 331 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 PARD3BQ8TEW8 1205 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 OSCP1Q8WVF1 389 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 MRPL45Q9BRJ2 306 aaKnown RBP13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 TTLL2Q9BWV7 592 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 ELOVL4Q9GZR5 314 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 XYLT2Q9H1B5 865 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 EBF3Q9H4W6 596 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 GMEB2Q9UKD1 530 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 RAB23Q9ULC3 237 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 ARHGAP26Q9UNA1 814 aa13.98□□□□□ -0.17
AC009055.1-201ENST00000562656 FAM237AA0A1B0GTK4 181 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 OTOL1A6NHN0 477 aaPredicted RBP13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 PDXKO00764 312 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 PHACTR2O75167 634 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 KIF20AO95235 890 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 PFKFB1P16118 471 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 PTPN1P18031 435 aaKnown RBP13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 HDCP19113 662 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 SDHBP21912 280 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 MYL6P60660 151 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 USP4Q13107 963 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 KCNB1Q14721 858 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 KMT5BQ4FZB7 885 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 LAIR1Q6GTX8 287 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 Q6ZS52 159 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 GRAMD1CQ8IYS0 662 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 CPA6Q8N4T0 437 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
AC009055.1-201ENST00000562656 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms