RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SMARCD1Q96GM5 515 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 CPXM1Q96SM3 734 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 SLC4A5Q9BY07 1137 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 B3GNT5Q9BYG0 378 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 CWH43Q9H720 699 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 CRTAC1Q9NQ79 661 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 SPG21Q9NZD8 308 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 IP6K2Q9UHH9 426 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 COG5Q9UP83 839 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 HYOU1Q9Y4L1 999 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 PCDHB12Q9Y5F1 795 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 ALG6Q9Y672 507 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 SLC4A7Q9Y6M7 1214 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 NLRC5Q86WI3 1866 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 KIAA1671Q9BY89 1806 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 TMEM110-MUSTN1A8MSY1 372 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 MIF4GDA9UHW6 222 aaKnown RBP10.86□□□□□ -0.67
USP3-219ENST00000561326 NT5C1B-RDH14C9J2C7 533 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 GOLGA8SH3BPF8 625 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 ENC1O14682 589 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 HCRTO43612 131 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 AP1G2O75843 785 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 FTCDO95954 541 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 FGFR3P22607 806 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 TKTP29401 623 aaKnown RBP10.86□□□□□ -0.67
USP3-219ENST00000561326 PPM1AP35813 382 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 PLA2G4AP47712 749 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 KRT17Q04695 432 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 MRPL58Q14197 206 aaKnown RBP10.86□□□□□ -0.67
USP3-219ENST00000561326 PIGHQ14442 188 aaPredicted RBP10.86□□□□□ -0.67
USP3-219ENST00000561326 CTXN3Q4LDR2 81 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 C2CD6Q53TS8 623 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
USP3-219ENST00000561326 TMEM240Q5SV17 173 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 CYP4A22Q5TCH4 519 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 OR6B2Q6IFH4 312 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 PMF1Q6P1K2 205 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 C16orf59Q7L2K0 433 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 PHLDB2Q86SQ0 1253 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 XYLT1Q86Y38 959 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 SPATA2LQ8IUW3 424 aaPredicted RBP10.86□□□□□ -0.67
USP3-219ENST00000561326 FIBCD1Q8N539 461 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 UBL4BQ8N7F7 174 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 KCTD13Q8WZ19 329 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 HERVK_113Q902F9 699 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 MCRS1Q96EZ8 462 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 TMEM169Q96HH4 297 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 PCED1BQ96HM7 432 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 IGSF21Q96ID5 467 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 PBKQ96KB5 322 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 SLC9A7Q96T83 725 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 LPIN3Q9BQK8 851 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 RTP3Q9BQQ7 232 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 TTPALQ9BTX7 342 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 PLVAPQ9BX97 442 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 GPR62Q9BZJ7 368 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 LRRC4Q9HBW1 653 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 ABCB6Q9NP58 842 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 RNF14Q9UBS8 474 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 CYTH4Q9UIA0 394 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 CDC23Q9UJX2 597 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 SNX12Q9UMY4 172 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP3-219ENST00000561326 NR2E3Q9Y5X4 410 aa10.86□□□□□ -0.67
USP3-219ENST00000561326 ZNF638Q14966 1978 aaKnown RBP10.86□□□□□ -0.67
USP3-219ENST00000561326 TMEM191CA6NGB0 347 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 E5RJQ4 531 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 F8W810 466 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 CLDN5O00501 218 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 SART1O43290 800 aaKnown RBP10.85□□□□□ -0.67
USP3-219ENST00000561326 SPOPO43791 374 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 FBXO21O94952 628 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 GJB5O95377 273 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 ERBB2P04626 1255 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 ATP1A1P05023 1023 aaKnown RBP10.85□□□□□ -0.67
USP3-219ENST00000561326 SCNN1AP37088 669 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 PAFAH1B1P43034 410 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 RGS7P49802 495 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 TUBB4BP68371 445 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 SLC6A3Q01959 620 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 ACAP1Q15027 740 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 CLUL1Q15846 466 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 WHAMMP3Q1A5X7 153 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 EFHC1Q5JVL4 640 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 PAQR9Q6ZVX9 377 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 NT5DC3Q86UY8 548 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 FAM35AQ86V20 835 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 COLGALT1Q8NBJ5 622 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 MNS1Q8NEH6 495 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 ABHD8Q96I13 439 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 RAD9AQ99638 391 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 NCAPGQ9BPX3 1015 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.85□□□□□ -0.673e-6■□□□□ 10.1
USP3-219ENST00000561326 TLR10Q9BXR5 811 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 ZCWPW1Q9H0M4 648 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 KRT82Q9NSB4 513 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 MARCH5Q9NX47 278 aa10.85□□□□□ -0.67
USP3-219ENST00000561326 PCDHB5Q9Y5E4 795 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms