RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 FZD5Q13467 585 aa18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 ARHGAP29Q52LW3 1261 aa18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 ZNF687Q8N1G0 1237 aa18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 MYCBPAPQ8TBZ2 947 aa18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 SYAP1Q96A49 352 aaPredicted RBP18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 NELL2Q99435 816 aa18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 GTSE1Q9NYZ3 720 aa18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 MAGEC2Q9UBF1 373 aaPredicted RBP18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 UXTQ9UBK9 157 aaPredicted RBP18.37■□□□□ 0.53
CDC42BPB-208ENST00000561271 NCAM2O15394 837 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 LAMTOR5O43504 91 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 VNN1O95497 513 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 DDX6P26196 483 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 ATICP31939 592 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 GNL1P36915 607 aaPredicted RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 RPS9P46781 194 aaKnown RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 KPNA1P52294 538 aaPredicted RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 CLDN10P78369 228 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 TNK2Q07912 1038 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 NCOA4Q13772 614 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 MAPRE1Q15691 268 aaKnown RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 CELF5Q8N6W0 485 aaKnown RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 RIN3Q8TB24 985 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 TMEM174Q8WUU8 243 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 MYO18AQ92614 2054 aaKnown RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 USP13Q92995 863 aaPredicted RBP18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 MYRFLQ96LU7 910 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 TRPC7Q9HCX4 862 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 ZMYM5Q9UJ78 669 aa18.36■□□□□ 0.53
CDC42BPB-208ENST00000561271 FRYLO94915 3013 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 C4BPAP04003 597 aaKnown RBP18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 NR2F2P24468 414 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 CTHP32929 405 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 GRIK1P39086 918 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 AP3M2P53677 418 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 ZNF667Q5HYK9 610 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 TXNDC11Q6PKC3 985 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 VSTM1Q6UX27 236 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 MON1AQ86VX9 555 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 SMYD4Q8IYR2 804 aaPredicted RBP18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 B3GALNT2Q8NCR0 500 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 TMEM30AQ9NV96 361 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 TRAF3IP3Q9Y228 551 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 FRMD4BQ9Y2L6 1034 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 GPR179Q6PRD1 2367 aa18.35■□□□□ 0.53
CDC42BPB-208ENST00000561271 A8MXQ7 604 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 SPECC1L-ADORA2AF8WAN1 911 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 KIF20AO95235 890 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 PTPN1P18031 435 aaKnown RBP18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 ANXA13P27216 316 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 CACNA2D1P54289 1103 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 CDH8P55286 799 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 USP46P62068 366 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 PLCB2Q00722 1185 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 MTAPQ13126 283 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 PNOCQ13519 176 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 KCNB1Q14721 858 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 C1orf220Q5T0J3 134 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 TTC16Q8NEE8 873 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 TMC2Q8TDI7 906 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 MSANTD3Q96H12 275 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 SLC22A12Q96S37 553 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 ZNF518BQ9C0D4 1074 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 SDCBP2Q9H190 292 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 CHRDQ9H2X0 955 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 VRTNQ9H8Y1 702 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 KIF9Q9HAQ2 790 aa18.34■□□□□ 0.53
CDC42BPB-208ENST00000561271 C2orf78A6NCI8 922 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 F8VP50 259 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 CLDN5O00501 218 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 TRIM66O15016 1216 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 CKMP06732 381 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 TRIM49P0CI25 452 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 TRIM49CP0CI26 452 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 PIK3CAP42336 1068 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 CSTF1Q05048 431 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 ZACNQ401N2 412 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 WDR44Q5JSH3 913 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 TRIM68Q6AZZ1 485 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 ZC3H14Q6PJT7 736 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 TSSK4Q6SA08 328 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 DENND5BQ6ZUT9 1274 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 GUF1Q8N442 669 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 SPATA17Q96L03 361 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 B3GNT5Q9BYG0 378 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 C8orf33Q9H7E9 229 aaPredicted RBP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 PRMT8Q9NR22 394 aaPredicted RBP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 RBM12Q9NTZ6 932 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 TDP1Q9NUW8 608 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 THG1LQ9NWX6 298 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 FBXO4Q9UKT5 387 aa18.33■□□□□ 0.52
CDC42BPB-208ENST00000561271 TRAV19A0A0A6YYK7 116 aa18.32■□□□□ 0.52
CDC42BPB-208ENST00000561271 AKAP3O75969 853 aa18.32■□□□□ 0.52
CDC42BPB-208ENST00000561271 CHRNB1P11230 501 aa18.32■□□□□ 0.52
CDC42BPB-208ENST00000561271 VAMP7P51809 220 aa18.32■□□□□ 0.52
CDC42BPB-208ENST00000561271 MLLT6P55198 1093 aaPredicted RBP18.32■□□□□ 0.52
CDC42BPB-208ENST00000561271 NUCB2P80303 420 aa18.32■□□□□ 0.52
CDC42BPB-208ENST00000561271 ORC1Q13415 861 aa18.32■□□□□ 0.52
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