RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
IRF9-211ENST00000560852 NPR3P17342 541 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 ATF6P18850 670 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 CYP2F1P24903 491 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 CDH5P33151 784 aaPredicted RBP12.84□□□□□ -0.35
IRF9-211ENST00000560852 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 ARPP19P56211 112 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 ZBED6P86452 979 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
IRF9-211ENST00000560852 ARHGAP44Q17R89 818 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 RAB41Q5JT25 222 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 PPM1LQ5SGD2 360 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 ZNF276Q8N554 614 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 SLC7A14Q8TBB6 771 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 KCTD13Q8WZ19 329 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 NECTIN4Q96NY8 510 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 PGLYRP2Q96PD5 576 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 SMOQ99835 787 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 SYT11Q9BT88 431 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 ZNF518BQ9C0D4 1074 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 IGFLR1Q9H665 355 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
IRF9-211ENST00000560852 TMEM30AQ9NV96 361 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 CLDND1Q9NY35 253 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 USP3Q9Y6I4 520 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 ATG2AQ2TAZ0 1938 aa12.84□□□□□ -0.35
IRF9-211ENST00000560852 MYO7AQ13402 2215 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 XPO1O14980 1071 aaKnown RBP12.83□□□□□ -0.36
IRF9-211ENST00000560852 CYP26A1O43174 497 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 FGF19O95750 216 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 GYPCP04921 128 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 FAM200BP0CF97 657 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 CSH1P0DML2 217 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 CSH2P0DML3 217 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 CYP11B1P15538 503 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 FERP16591 822 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 BDNFP23560 247 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 WEE1P30291 646 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 CDC25BP30305 580 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 CA8P35219 290 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 GPD2P43304 727 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 PLA2G4AP47712 749 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 ZNF75DP51815 510 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 BCAT1P54687 386 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 EPHB3P54753 998 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
IRF9-211ENST00000560852 CYP27A1Q02318 531 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 SNX30Q5VWJ9 437 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 CLEC20AQ6ZU45 233 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 DNAJB7Q7Z6W7 309 aaPredicted RBP12.83□□□□□ -0.36
IRF9-211ENST00000560852 ITIH5Q86UX2 942 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 TTC30AQ86WT1 665 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 GLYCTKQ8IVS8 523 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 TTC9BQ8N6N2 239 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 EPS8L1Q8TE68 723 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 OVCA2Q8WZ82 227 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 HSFY1Q96LI6 401 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 SPAG5Q96R06 1193 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 LPIN3Q9BQK8 851 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 TRIM5Q9C035 493 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 WDR6Q9NNW5 1121 aaKnown RBP12.83□□□□□ -0.36
IRF9-211ENST00000560852 ABI2Q9NYB9 513 aaPredicted RBP12.83□□□□□ -0.36
IRF9-211ENST00000560852 CD207Q9UJ71 328 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 ZMYM5Q9UJ78 669 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 NOCTQ9UK39 431 aaKnown RBP12.83□□□□□ -0.36
IRF9-211ENST00000560852 TSPAN16Q9UKR8 245 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 SLC27A5Q9Y2P5 690 aa12.83□□□□□ -0.36
IRF9-211ENST00000560852 BZW2Q9Y6E2 419 aaKnown RBP12.83□□□□□ -0.36
IRF9-211ENST00000560852 CLDN5O00501 218 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 RFPL2O75678 378 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 LSM8O95777 96 aaKnown RBP12.82□□□□□ -0.36
IRF9-211ENST00000560852 LRG1P02750 347 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 SPATA31D3P0C874 917 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 KRT5P13647 590 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 CCDC130P13994 396 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 PTPN2P17706 415 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 PFKLP17858 780 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 GNA15P30679 374 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 MTHFRP42898 656 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 PPP3CCP48454 512 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 CACNA2D1P54289 1103 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 BST2Q10589 180 aaKnown RBP12.82□□□□□ -0.36
IRF9-211ENST00000560852 TWF1Q12792 350 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 SMAD4Q13485 552 aaKnown RBP12.82□□□□□ -0.36
IRF9-211ENST00000560852 RAPGEF1Q13905 1077 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 MGAT5BQ3V5L5 792 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 ATAT1Q5SQI0 421 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 PM20D1Q6GTS8 502 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 SPATA31D4Q6ZUB0 917 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 CACNA2D4Q7Z3S7 1137 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.82□□□□□ -0.36
IRF9-211ENST00000560852 TMEM110Q86TL2 294 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 SLC47A2Q86VL8 602 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 TMC8Q8IU68 726 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 NUP93Q8N1F7 819 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 ZNF397Q8NF99 534 aaPredicted RBP12.82□□□□□ -0.36
IRF9-211ENST00000560852 ZNF512Q96ME7 567 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms