RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 NRDE2Q9H7Z3 1164 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 ST7Q9NRC1 585 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 STK39Q9UEW8 545 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 NME7Q9Y5B8 376 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 PCDHA3Q9Y5H8 950 aa12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 TDRD15B5MCY1 1934 aaKnown RBP12.48□□□□□ -0.41
AC087878.1-201ENST00000560709 HTTP42858 3142 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 OR6C75A6NL08 312 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 TBKBP1A7MCY6 615 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 DDX3YO15523 660 aaKnown RBP12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 FBXO21O94952 628 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 OAZ2O95190 189 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 ADORA2BP29275 332 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 SSTR3P32745 418 aaPredicted RBP12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 CETN2P41208 172 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 PDE4CQ08493 712 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 PPIGQ13427 754 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 FAM102AQ5T9C2 384 aaPredicted RBP12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 FAM171BQ6P995 826 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 ZNF280BQ86YH2 543 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 RHOT1Q8IXI2 618 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 FUKQ8N0W3 1084 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 UBA3Q8TBC4 463 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 MAIP1Q8WWC4 291 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 CD101Q93033 1021 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 CAPZA3Q96KX2 299 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 MCEEQ96PE7 176 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 MED10Q9BTT4 135 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 PRDM5Q9NQX1 630 aaPredicted RBP12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 ASNSD1Q9NWL6 643 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 CYTH4Q9UIA0 394 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 TTC3P53804 2025 aa12.47□□□□□ -0.41
AC087878.1-201ENST00000560709 GOLGA6L10A0A0M3HER8 536 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 TARSL2A2RTX5 802 aaKnown RBP12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 E5RJQ4 531 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 CCDC188H7C350 402 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 H7C4K7 107 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 DPYSL4O14531 572 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 NRP1O14786 923 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 SRGAP2O75044 1071 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 ERLIN1O75477 346 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 GLI1P08151 1106 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 CCDC130P13994 396 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 BRCC3P46736 316 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 SLC6A3Q01959 620 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 ELF2Q15723 593 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 NFE2Q16621 373 aaPredicted RBP12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 HADHQ16836 314 aaKnown RBP12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 MDH1BQ5I0G3 518 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 EFHC1Q5JVL4 640 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 CYP4A22Q5TCH4 519 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 OR6B2Q6IFH4 312 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 ZNF280DQ6N043 979 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 PMF1Q6P1K2 205 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 SLC26A9Q7LBE3 791 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 POLNQ7Z5Q5 900 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 UBE2Q1Q7Z7E8 422 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 FAM35AQ86V20 835 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 CMTR2Q8IYT2 770 aaKnown RBP12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 MMGT1Q8N4V1 131 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 SPATA4Q8NEY3 305 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 TOP1MTQ969P6 601 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 TRIM62Q9BVG3 475 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 MCOLN1Q9GZU1 580 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 LRRC4Q9HBW1 653 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 TMEM51Q9NW97 253 aa12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 DDX56Q9NY93 547 aaKnown RBP12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 PACSIN2Q9UNF0 486 aaPredicted RBP12.46□□□□□ -0.41
AC087878.1-201ENST00000560709 TRIM43BA6NCK2 446 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 GOLGA8SH3BPF8 625 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 CEP104O60308 925 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 DGKIO75912 1065 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 RNF8O76064 485 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 GALTP07902 379 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 KRT7P08729 469 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 GPD1P21695 349 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 ACAT1P24752 427 aaKnown RBP12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 PSMA2P25787 234 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 PCK1P35558 622 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 ALDH7A1P49419 539 aaKnown RBP12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 ZNF143P52747 638 aaPredicted RBP12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 BRD3Q15059 726 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 C2CD6Q53TS8 623 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 OLFML1Q6UWY5 402 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 FAM183BPQ6ZVS7 135 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 SIX6OS1Q8N1H7 587 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 SCML4Q8N228 414 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 TRIM43Q96BQ3 446 aaPredicted RBP12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 PCED1BQ96HM7 432 aa12.45□□□□□ -0.42
AC087878.1-201ENST00000560709 RBM41Q96IZ5 413 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms