RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 SKOR2Q2VWA4 1001 aaPredicted RBP12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 MGAT5BQ3V5L5 792 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 MOXD1Q6UVY6 613 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 MON1AQ86VX9 555 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 GIPC2Q8TF65 315 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 CCDC94Q9BW85 323 aaPredicted RBP12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 CYP8B1Q9UNU6 501 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 RBM8AQ9Y5S9 174 aaKnown RBP12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 NID2Q14112 1375 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 M0QZQ0 153 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 BRINP1O60477 761 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 F11P03951 625 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 APODP05090 189 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 KCNE1P15382 129 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ATF6P18850 670 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 CDC27P30260 824 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 GRK6P43250 576 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 C6orf132Q5T0Z8 1188 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 EMC10Q5UCC4 262 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 MAEAQ7L5Y9 396 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ERICH1Q86X53 443 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 SFTPA1Q8IWL2 248 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ZCCHC9Q8N567 271 aaKnown RBP12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ZNF248Q8NDW4 579 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 FAM20AQ96MK3 541 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ACAP3Q96P50 834 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 PNKPQ96T60 521 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 LINC00597Q9H2U6 94 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ZDHHC4Q9NPG8 344 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 GPRC5CQ9NQ84 441 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 BRPF3Q9ULD4 1205 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 ITPR2Q14571 2701 aa12.32□□□□□ -0.44
KNSTRN-211ENST00000560673 MEI4A8MW99 385 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 SLC37A4O43826 429 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 KAT7O95251 611 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 EDN1P05305 212 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 CDK4P11802 303 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 GRM5P41594 1212 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 KIR2DL1P43626 348 aaPredicted RBP12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 OSTNP61366 133 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 NFATC3Q12968 1075 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 USP4Q13107 963 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 TBC1D25Q3MII6 688 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 ATF7IP2Q5U623 682 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 NCAPH2Q6IBW4 605 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 ATG14Q6ZNE5 492 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 NAF1Q96HR8 494 aaKnown RBP12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 MIR1-1HGQ9H1L0 117 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 GMIPQ9P107 970 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 NFE2L3Q9Y4A8 694 aa12.31□□□□□ -0.44
KNSTRN-211ENST00000560673 TLN1Q9Y490 2541 aaKnown RBP12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 CCDC196A0A1B0GTZ2 297 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 CKMP06732 381 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 USP17L7P0C7H9 530 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 ADD1P35611 737 aaKnown RBP12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 TNFRSF4P43489 277 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 RARRES1P49788 294 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 CLDN6P56747 220 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 RIPPLY3P57055 190 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 DMP1Q13316 513 aaPredicted RBP12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 CUL4AQ13619 759 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 RNF20Q5VTR2 975 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 OVOS1Q6IE37 1185 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 TRMT11Q7Z4G4 463 aaKnown RBP12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 CEP120Q8N960 986 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 DEPTORQ8TB45 409 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 DNASE2BQ8WZ79 361 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 KCNB2Q92953 911 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 NACC1Q96RE7 527 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 TM6SF1Q9BZW5 370 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 TMEM206Q9H813 350 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 TRPC7Q9HCX4 862 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 KCNMB3Q9NPA1 279 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 FTSJ1Q9UET6 329 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 SEPT3Q9UH03 358 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 PCDHGA1Q9Y5H4 931 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 CENPEQ02224 2701 aa12.3□□□□□ -0.44
KNSTRN-211ENST00000560673 A0A0A0MRY4 1105 aa12.29□□□□□ -0.44
KNSTRN-211ENST00000560673 BCAT2O15382 392 aaPredicted RBP12.29□□□□□ -0.44
KNSTRN-211ENST00000560673 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
KNSTRN-211ENST00000560673 TRAK2O60296 914 aa12.29□□□□□ -0.44
KNSTRN-211ENST00000560673 SLITRK3O94933 977 aa12.29□□□□□ -0.44
KNSTRN-211ENST00000560673 LYPLA2O95372 231 aa12.29□□□□□ -0.44
KNSTRN-211ENST00000560673 HOXB2P14652 356 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms