RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 CYP4A22Q5TCH4 519 aa20.73■□□□□ 0.91
SHF-205ENST00000559566 VSTM1Q6UX27 236 aa20.73■□□□□ 0.91
SHF-205ENST00000559566 PPM1KQ8N3J5 372 aa20.73■□□□□ 0.91
SHF-205ENST00000559566 AOPEPQ8N6M6 819 aa20.73■□□□□ 0.91
SHF-205ENST00000559566 ZMIZ2Q8NF64 920 aa20.73■□□□□ 0.91
SHF-205ENST00000559566 KCNK16Q96T55 309 aa20.73■□□□□ 0.91
SHF-205ENST00000559566 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.73■□□□□ 0.91
SHF-205ENST00000559566 AJAP1Q9UKB5 411 aaPredicted RBP20.73■□□□□ 0.91
SHF-205ENST00000559566 TADA3O75528 432 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 CALCAP01258 141 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 PRKCSHP14314 528 aaPredicted RBP20.72■□□□□ 0.91
SHF-205ENST00000559566 GABRR2P28476 465 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 ADORA2BP29275 332 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 CYP4F8P98187 520 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 VEPH1Q14D04 833 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 DPY19L2P1Q6NXN4 242 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 PARM1Q6UWI2 310 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 ITIH5Q86UX2 942 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 PLCD3Q8N3E9 789 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 SMOQ99835 787 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 MED10Q9BTT4 135 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 RPP25Q9BUL9 199 aaKnown RBP20.72■□□□□ 0.91
SHF-205ENST00000559566 NDST4Q9H3R1 872 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 SIX2Q9NPC8 291 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 KRT82Q9NSB4 513 aa20.72■□□□□ 0.91
SHF-205ENST00000559566 MAGED2Q9UNF1 606 aaPredicted RBP20.72■□□□□ 0.91
SHF-205ENST00000559566 TTC28Q96AY4 2481 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 RNF225M0QZC1 329 aaPredicted RBP20.71■□□□□ 0.91
SHF-205ENST00000559566 F11P03951 625 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 ZNF18P17022 549 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 PTMSP20962 102 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 EEF1GP26641 437 aaKnown RBP20.71■□□□□ 0.91
SHF-205ENST00000559566 PON1P27169 355 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 KCNMA1Q12791 1236 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 CETN1Q12798 172 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 HTR4Q13639 388 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 KRT31Q15323 416 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 PPP1R26Q5T8A7 1209 aaPredicted RBP20.71■□□□□ 0.91
SHF-205ENST00000559566 TRIM65Q6PJ69 517 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 DHX40Q8IX18 779 aaKnown RBP20.71■□□□□ 0.91
SHF-205ENST00000559566 LEMD2Q8NC56 503 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 FGF14Q92915 247 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 TMEM176AQ96HP8 235 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 SPATA17Q96L03 361 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 C8orf48Q96LL4 319 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 EPHX3Q9H6B9 360 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 KCNK12Q9HB15 430 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 NCANO14594 1321 aa20.71■□□□□ 0.91
SHF-205ENST00000559566 PTPRDP23468 1912 aa20.7■□□□□ 0.91
SHF-205ENST00000559566 DOCK8Q8NF50 2099 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 ANHXE9PGG2 379 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 ZNF197O14709 1029 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 AP1G2O75843 785 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 MICAL2O94851 1124 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 CSH1P0DML2 217 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 CSH2P0DML3 217 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 FCARP24071 287 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 TBXAS1P24557 533 aaPredicted RBP20.7■□□□□ 0.9
SHF-205ENST00000559566 ZSCAN23Q3MJ62 389 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 GBP6Q6ZN66 633 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 CYFIP2Q96F07 1278 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 HNRNPABQ99729 332 aaKnown RBP20.7■□□□□ 0.9
SHF-205ENST00000559566 ATXN3LQ9H3M9 355 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 NUMBLQ9Y6R0 609 aa20.7■□□□□ 0.9
SHF-205ENST00000559566 GTPBP10A4D1E9 387 aaKnown RBP20.69■□□□□ 0.9
SHF-205ENST00000559566 TRIM66O15016 1216 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 GCNT1Q02742 428 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 PTPN21Q16825 1174 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 EXOC3L4Q17RC7 722 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 FAM78AQ5JUQ0 283 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 APTXQ7Z2E3 356 aaKnown RBP20.69■□□□□ 0.9
SHF-205ENST00000559566 GPIHBP1Q8IV16 184 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 SMARCD1Q96GM5 515 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 MYRFLQ96LU7 910 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 HEXIM2Q96MH2 286 aaKnown RBP20.69■□□□□ 0.9
SHF-205ENST00000559566 BPIFA3Q9BQP9 254 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 ZSWIM1Q9BR11 485 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 VPS16Q9H269 839 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 CSNK1G1Q9HCP0 422 aa20.69■□□□□ 0.9
SHF-205ENST00000559566 UBE2TQ9NPD8 197 aaPredicted RBP20.69■□□□□ 0.9
SHF-205ENST00000559566 PI4K2BG5E9Z4 385 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 TNFRSF10BO14763 440 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 ATP1A3P13637 1013 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 MAP3K7CLP57077 242 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 TAF12Q16514 161 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 TMEM270Q6UE05 265 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 CLEC20AQ6ZU45 233 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 GPRIN1Q7Z2K8 1008 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 TFAP2BQ92481 460 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 RSPRY1Q96DX4 576 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 TRMT2BQ96GJ1 504 aaKnown RBP20.68■□□□□ 0.9
SHF-205ENST00000559566 KXD1Q9BQD3 176 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 TTLL2Q9BWV7 592 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 PLA2G2FQ9BZM2 168 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 FAM124BQ9H5Z6 455 aaPredicted RBP20.68■□□□□ 0.9
SHF-205ENST00000559566 GDE1Q9NZC3 331 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 PCDHB4Q9Y5E5 795 aa20.68■□□□□ 0.9
SHF-205ENST00000559566 ZFP37Q9Y6Q3 630 aaPredicted RBP20.68■□□□□ 0.9
SHF-205ENST00000559566 HHLA1C9JL84 531 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms