RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 KLC4Q9NSK0 619 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 SACM1LQ9NTJ5 587 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 COL20A1Q9P218 1284 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 AFF4Q9UHB7 1163 aaKnown RBP4.1□□□□□ -1.75
CASC4-210ENST00000559550 ISM1B1AKI9 464 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 F8W8V4 182 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 MAP4K4O95819 1239 aaPredicted RBP4.09□□□□□ -1.75
CASC4-210ENST00000559550 CSF1RP07333 972 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 CYP2C9P11712 490 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 LIPAP38571 399 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 WNT3P56703 355 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 RPS16P62249 146 aaKnown RBP4.09□□□□□ -1.75
CASC4-210ENST00000559550 MYO1EQ12965 1108 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 RAB32Q13637 225 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 NBPF8Q3BBV2 869 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 PLA1AQ53H76 456 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 ICE2Q659A1 982 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 DTX2Q86UW9 622 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 GAS2L3Q86XJ1 694 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 ATG4AQ8WYN0 398 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 SLC9A6Q92581 669 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 NMD3Q96D46 503 aaKnown RBP4.09□□□□□ -1.75
CASC4-210ENST00000559550 SUCLG2Q96I99 432 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 MOGAT1Q96PD6 335 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 NELL2Q99435 816 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 LRRC27Q9C0I9 530 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 ZNF287Q9HBT7 754 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 KIAA1586Q9HCI6 787 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 A1CFQ9NQ94 594 aaKnown RBP4.09□□□□□ -1.75
CASC4-210ENST00000559550 NDRG4Q9ULP0 352 aaKnown RBP4.09□□□□□ -1.75
CASC4-210ENST00000559550 ST3GAL5Q9UNP4 418 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 SHOC2Q9UQ13 582 aa4.09□□□□□ -1.75
CASC4-210ENST00000559550 PYCARD-AS1I3L0S3 204 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 MGEA5O60502 916 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 CDK4P11802 303 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 JUPP14923 745 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 ZKSCAN1P17029 563 aaPredicted RBP4.08□□□□□ -1.76
CASC4-210ENST00000559550 KCNA3P22001 575 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 CD38P28907 300 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 ADORA2AP29274 412 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 GRIA3P42263 894 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 CLCN2P51788 898 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 DGKEP52429 567 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 KRT17Q04695 432 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 PTCHD3Q3KNS1 767 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 SFRP4Q6FHJ7 346 aaPredicted RBP4.08□□□□□ -1.76
CASC4-210ENST00000559550 PBKQ96KB5 322 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 TLK1Q9UKI8 766 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 OGDHLQ9ULD0 1010 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 FAM50BQ9Y247 325 aa4.08□□□□□ -1.76
CASC4-210ENST00000559550 APAF1O14727 1248 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 KIF3BO15066 747 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 C1QL1O75973 258 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 URI1O94763 535 aaPredicted RBP4.07□□□□□ -1.76
CASC4-210ENST00000559550 IL6RP08887 468 aaPredicted RBP4.07□□□□□ -1.76
CASC4-210ENST00000559550 NR2F6P10588 404 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 XRCC6P12956 609 aaKnown RBP eCLIP4.07□□□□□ -1.76
CASC4-210ENST00000559550 SLC5A1P13866 664 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 IL1R1P14778 569 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 ZFXP17010 805 aaPredicted RBP4.07□□□□□ -1.76
CASC4-210ENST00000559550 LRPAP1P30533 357 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 GNALP38405 381 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 PIK3CBP42338 1070 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 CACNA2D1P54289 1103 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 E2F2Q14209 437 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 LY6KQ17RY6 165 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 MGAT5BQ3V5L5 792 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 SLC44A4Q53GD3 710 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 TREML2Q5T2D2 321 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 DEPDC1Q5TB30 811 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 KCTD20Q7Z5Y7 419 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 KRT78Q8N1N4 520 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 FAM98AQ8NCA5 519 aaKnown RBP4.07□□□□□ -1.76
CASC4-210ENST00000559550 BPIFB1Q8TDL5 484 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 TTC17Q96AE7 1141 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 DUSP26Q9BV47 211 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 SARGQ9BW04 601 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 STK31Q9BXU1 1019 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 KLK15Q9H2R5 256 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 R3HDMLQ9H3Y0 253 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 ASB6Q9NWX5 421 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 EHD3Q9NZN3 535 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 SNX14Q9Y5W7 946 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 COX11Q9Y6N1 276 aa4.07□□□□□ -1.76
CASC4-210ENST00000559550 CCDC151A5D8V7 595 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 MBD3L4A6NDZ8 208 aaPredicted RBP4.06□□□□□ -1.76
CASC4-210ENST00000559550 MBD3L3A6NE82 208 aaPredicted RBP4.06□□□□□ -1.76
CASC4-210ENST00000559550 PQBP1O60828 265 aaKnown RBP4.06□□□□□ -1.76
CASC4-210ENST00000559550 VNN1O95497 513 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 FESP07332 822 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 ITPKBP27987 946 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 HTRA4P83105 476 aaPredicted RBP4.06□□□□□ -1.76
CASC4-210ENST00000559550 ERCC6LQ2NKX8 1250 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 COBLL1Q53SF7 1204 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 UNC13DQ70J99 1090 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 SLC15A3Q8IY34 581 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 CAGE1Q8TC20 777 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 TMEM171Q8WVE6 324 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 ATRIPQ8WXE1 791 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 GLG1Q92896 1179 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms