RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CDH8P55286 799 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 NCOA4Q13772 614 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 ZNF667Q5HYK9 610 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 TXNDC11Q6PKC3 985 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 VSTM1Q6UX27 236 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 MON1AQ86VX9 555 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 RIN3Q8TB24 985 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 MYCBPAPQ8TBZ2 947 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 TRMT2BQ96GJ1 504 aaKnown RBP12.72□□□□□ -0.37
HERC1-202ENST00000558324 SLC22A12Q96S37 553 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 CYP2S1Q96SQ9 504 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 ZNF518BQ9C0D4 1074 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 CHRDQ9H2X0 955 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 EBF3Q9H4W6 596 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 C8orf33Q9H7E9 229 aaPredicted RBP12.72□□□□□ -0.37
HERC1-202ENST00000558324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.37
HERC1-202ENST00000558324 GKN1Q9NS71 199 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 TDP1Q9NUW8 608 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 ZMYM5Q9UJ78 669 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 FBXO4Q9UKT5 387 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 FRMD4BQ9Y2L6 1034 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 DMDP11532 3685 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 TRAV19A0A0A6YYK7 116 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 C2orf78A6NCI8 922 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 F8VP50 259 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 CLDN5O00501 218 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 RHOBTB3O94955 611 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 KIF20AO95235 890 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 VNN1O95497 513 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 LMNAP02545 664 aaKnown RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 C4BPAP04003 597 aaKnown RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 CHRNB1P11230 501 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 ARSAP15289 507 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 NR2F2P24468 414 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 WEE1P30291 646 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 AP3M2P53677 418 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 CACNA2D1P54289 1103 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 USP46P62068 366 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 IFRD2Q12894 506 aaPredicted RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 PON2Q15165 354 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 ITPRIPL2Q3MIP1 535 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 CC2D1AQ6P1N0 951 aaPredicted RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 Q6ZS52 159 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 DENND5BQ6ZUT9 1274 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 RALGPS2Q86X27 583 aaPredicted RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 SMYD4Q8IYR2 804 aaPredicted RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 ARL14EPQ8N8R7 260 aaPredicted RBP12.71□□□□□ -0.37
HERC1-202ENST00000558324 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 MSANTD3Q96H12 275 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 MYRFLQ96LU7 910 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 HINFPQ9BQA5 517 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 MMRN2Q9H8L6 949 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 KIF9Q9HAQ2 790 aa12.71□□□□□ -0.37
HERC1-202ENST00000558324 OBSL1O75147 1896 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 GOLGA6L4A6NEF3 574 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 TRIM66O15016 1216 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
HERC1-202ENST00000558324 ABL1P00519 1130 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 TRIM49P0CI25 452 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 TRIM49CP0CI26 452 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 PIK3CAP42336 1068 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 CLDN10P78369 228 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 ORC1Q13415 861 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 LRRC32Q14392 662 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 KCNB1Q14721 858 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 ZNF528Q3MIS6 628 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 SPOPLQ6IQ16 392 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 ATRIPQ8WXE1 791 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 FAM83CQ9BQN1 747 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 ELOVL4Q9GZR5 314 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 SDCBP2Q9H190 292 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 HPS4Q9NQG7 708 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 PRMT8Q9NR22 394 aaPredicted RBP12.7□□□□□ -0.38
HERC1-202ENST00000558324 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 TRAF3IP3Q9Y228 551 aa12.7□□□□□ -0.38
HERC1-202ENST00000558324 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
HERC1-202ENST00000558324 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
HERC1-202ENST00000558324 AKAP3O75969 853 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 VAMP7P51809 220 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 MLLT6P55198 1093 aaPredicted RBP12.69□□□□□ -0.38
HERC1-202ENST00000558324 SATB1Q01826 763 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 FAM160A1Q05DH4 1040 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 PNOCQ13519 176 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 RUNX3Q13761 415 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 GAS6Q14393 721 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 MTF1Q14872 753 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 ZACNQ401N2 412 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 C1orf220Q5T0J3 134 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 C1orf228Q6PIY5 440 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 SV2AQ7L0J3 742 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 ACOT1Q86TX2 421 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms