RNA–Protein interactions for RNA: ENST00000557849.1

INO80-203, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-203ENST00000557849 ARL14EPQ8N8R7 260 aaPredicted RBP9.28□□□□□ -0.92
INO80-203ENST00000557849 C12orf50Q8NA57 414 aaPredicted RBP9.28□□□□□ -0.92
INO80-203ENST00000557849 GLIS3Q8NEA6 775 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 POMGNT1Q8WZA1 660 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 DDX1Q92499 740 aaKnown RBP9.28□□□□□ -0.92
INO80-203ENST00000557849 MRPS31Q92665 395 aaKnown RBP9.28□□□□□ -0.92
INO80-203ENST00000557849 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 CBWD1Q9BRT8 395 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 TMEM121BQ9BXQ6 578 aaPredicted RBP9.28□□□□□ -0.92
INO80-203ENST00000557849 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 CRTAC1Q9NQ79 661 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 TMEM30AQ9NV96 361 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 DUS2Q9NX74 493 aaKnown RBP9.28□□□□□ -0.92
INO80-203ENST00000557849 GDAP2Q9NXN4 497 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 TBC1D7Q9P0N9 293 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 EBF1Q9UH73 591 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 CLIC4Q9Y696 253 aa9.28□□□□□ -0.92
INO80-203ENST00000557849 FRMD3A2A2Y4 597 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 C4orf47A7E2U8 309 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 H3BQV1 296 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 CDX4O14627 284 aaPredicted RBP9.27□□□□□ -0.93
INO80-203ENST00000557849 TCF3P15923 654 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 HOXD13P35453 343 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 TSPY1Q01534 308 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 RABEP1Q15276 862 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 NFE2Q16621 373 aaPredicted RBP9.27□□□□□ -0.93
INO80-203ENST00000557849 CFAP221Q4G0U5 840 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 L1TD1Q5T7N2 865 aaKnown RBP9.27□□□□□ -0.93
INO80-203ENST00000557849 LMBRD2Q68DH5 695 aaPredicted RBP9.27□□□□□ -0.93
INO80-203ENST00000557849 RNF43Q68DV7 783 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 PSAPL1Q6NUJ1 521 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 TMEM92Q6UXU6 159 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 NT5DC4Q86YG4 428 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 CSGALNACT2Q8N6G5 542 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 OR5B17Q8NGF7 314 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 SH3RF2Q8TEC5 729 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 USP33Q8TEY7 942 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 CD101Q93033 1021 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 ZNF560Q96MR9 790 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 CLIC6Q96NY7 704 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 MTMR12Q9C0I1 747 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 RNF38Q9H0F5 515 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 TMEM206Q9H813 350 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 TRPC7Q9HCX4 862 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 VPS45Q9NRW7 570 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 FBXO2Q9UK22 296 aaPredicted RBP9.27□□□□□ -0.93
INO80-203ENST00000557849 SNX9Q9Y5X1 595 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 ATRXP46100 2492 aa9.27□□□□□ -0.93
INO80-203ENST00000557849 BPTFQ12830 3046 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 TRAV19A0A0A6YYK7 116 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 C1QTNF9BB2RNN3 333 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 SCAMP3O14828 347 aaKnown RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 EIF5BO60841 1220 aaKnown RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 HUS1O60921 280 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 APBB3O95704 486 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 CAVIN2O95810 425 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 CKMP06732 381 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 NEFLP07196 543 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 USP17L7P0C7H9 530 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 C1QTNF9P0C862 333 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 SPINK2P20155 84 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 PNPLA4P41247 253 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 CACNA2D1P54289 1103 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 PSMC1P62191 440 aaKnown RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 RPL10AP62906 217 aaKnown RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 CREB5Q02930 508 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 FBXO43Q4G163 708 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 LARP1BQ659C4 914 aaKnown RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 PMS2CLQ68D20 193 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 CC2D1AQ6P1N0 951 aaPredicted RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 FAM173BQ6P4H8 233 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 RASSF3Q86WH2 238 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 C12orf40Q86WS4 652 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 ADGRF2Q8IZF7 708 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 TMEM86AQ8N2M4 240 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 CPA6Q8N4T0 437 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 TOP6BLQ8N6T0 577 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 LRRC52Q8N7C0 313 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 FRMD1Q8N878 549 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 TTC16Q8NEE8 873 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 MDGA1Q8NFP4 955 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 ATP2A3Q93084 1043 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 HVCN1Q96D96 273 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 EDEM2Q9BV94 578 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 TPSD1Q9BZJ3 242 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 PCIF1Q9H4Z3 704 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 MRPL44Q9H9J2 332 aaKnown RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 RBAKQ9NYW8 714 aaPredicted RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 UXTQ9UBK9 157 aaPredicted RBP9.26□□□□□ -0.93
INO80-203ENST00000557849 ARHGAP26Q9UNA1 814 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 PCDH15Q96QU1 1955 aa9.26□□□□□ -0.93
INO80-203ENST00000557849 PRPF6O94906 941 aaKnown RBP9.25□□□□□ -0.93
INO80-203ENST00000557849 GCNT3O95395 438 aa9.25□□□□□ -0.93
INO80-203ENST00000557849 CYP17A1P05093 508 aa9.25□□□□□ -0.93
INO80-203ENST00000557849 PROS1P07225 676 aa9.25□□□□□ -0.93
INO80-203ENST00000557849 HDCP19113 662 aa9.25□□□□□ -0.93
INO80-203ENST00000557849 GARTP22102 1010 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms