RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 KLHDC7AQ5VTJ3 777 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 TCEAL8Q8IYN2 117 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 TTC9BQ8N6N2 239 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 C12orf76Q8N812 135 aaPredicted RBP13.01□□□□□ -0.33
RCCD1-209ENST00000557750 WHAMMQ8TF30 809 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 TMEM176AQ96HP8 235 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 HEXIM2Q96MH2 286 aaKnown RBP13.01□□□□□ -0.33
RCCD1-209ENST00000557750 ERGIC2Q96RQ1 377 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 RBSNQ9H1K0 784 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 CRISPLD1Q9H336 500 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 FAM49BQ9NUQ9 324 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 IFNKQ9P0W0 207 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 MAFFQ9ULX9 164 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 SIK3Q9Y2K2 1263 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 INSL5Q9Y5Q6 135 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 WDR87Q6ZQQ6 2873 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 ZMYND10O75800 440 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 LRG1P02750 347 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 UCHL3P15374 230 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 HOXB8P17481 243 aaPredicted RBP13□□□□□ -0.33
RCCD1-209ENST00000557750 ACO1P21399 889 aaKnown RBP13□□□□□ -0.33
RCCD1-209ENST00000557750 USP8P40818 1118 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 RAD23BP54727 409 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 UVSSAQ2YD98 709 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 RARS2Q5T160 578 aaKnown RBP13□□□□□ -0.33
RCCD1-209ENST00000557750 IQCEQ6IPM2 695 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 TMC5Q6UXY8 1006 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 CRYBG2Q8N1P7 616 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 UBR7Q8N806 425 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 C12orf29Q8N999 325 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 NEK11Q8NG66 645 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
RCCD1-209ENST00000557750 JAKMIP2Q96AA8 810 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 FUBP3Q96I24 572 aaKnown RBP eCLIP13□□□□□ -0.33
RCCD1-209ENST00000557750 RIPOR3Q96MK2 946 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 MED10Q9BTT4 135 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 RHOBTB2Q9BYZ6 727 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 IRF2BPLQ9H1B7 796 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 PLCB1Q9NQ66 1216 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 ZDHHC7Q9NXF8 308 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 AJAP1Q9UKB5 411 aaPredicted RBP13□□□□□ -0.33
RCCD1-209ENST00000557750 YIPF1Q9Y548 306 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 FHOD1Q9Y613 1164 aa13□□□□□ -0.33
RCCD1-209ENST00000557750 RIF1Q5UIP0 2472 aaKnown RBP13□□□□□ -0.33
RCCD1-209ENST00000557750 CCDC195A0A1B0GUA6 201 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CLDN5O00501 218 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CCL16O15467 120 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 SOAT2O75908 522 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 TPM3P06753 285 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CCDC130P13994 396 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CD19P15391 556 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 RFX1P22670 979 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 BDNFP23560 247 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CYP2F1P24903 491 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 ALDH1A3P47895 512 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 TUFMP49411 452 aaKnown RBP12.99□□□□□ -0.33
RCCD1-209ENST00000557750 POLR2FP61218 127 aaKnown RBP12.99□□□□□ -0.33
RCCD1-209ENST00000557750 TWF1Q12792 350 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 NR1I3Q14994 352 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CFAP221Q4G0U5 840 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 DPY19L2P1Q6NXN4 242 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 RTL10Q7L3V2 364 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
RCCD1-209ENST00000557750 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 B3GNT5Q9BYG0 378 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 ABCB6Q9NP58 842 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 HSFX1Q9UBD0 423 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 ATP8B3O60423 1300 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 HNRNPA1P09651 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
RCCD1-209ENST00000557750 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
RCCD1-209ENST00000557750 ADORA2BP29275 332 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 PLD1Q13393 1074 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CES5AQ6NT32 575 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 SCN4BQ8IWT1 228 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 SHC3Q92529 594 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 CYFIP2Q96F07 1278 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 ZNF518BQ9C0D4 1074 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 XPO4Q9C0E2 1151 aaKnown RBP12.99□□□□□ -0.33
RCCD1-209ENST00000557750 GANQ9H2C0 597 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 PDCL3Q9H2J4 239 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 PIDD1Q9HB75 910 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 NR2E1Q9Y466 385 aa12.99□□□□□ -0.33
RCCD1-209ENST00000557750 VPS13AQ96RL7 3174 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 RNF225M0QZC1 329 aaPredicted RBP12.98□□□□□ -0.33
RCCD1-209ENST00000557750 EPHB6O15197 1021 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 CBFA2T2O43439 604 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 GALR2O43603 387 aaPredicted RBP12.98□□□□□ -0.33
RCCD1-209ENST00000557750 XYLBO75191 536 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 NOL4O94818 638 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 PAEPP09466 180 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 HOXA9P31269 272 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 GRIK1P39086 918 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 NUBP1P53384 320 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 ITIH3Q06033 890 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 CCDC173Q0VFZ6 552 aa12.98□□□□□ -0.33
RCCD1-209ENST00000557750 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms