RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TRMT1LQ7Z2T5 733 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ZSWIM9Q86XI8 627 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 CCDC60Q8IWA6 550 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SDR16C5Q8N3Y7 309 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 LINC01465Q8N7H1 131 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 MNS1Q8NEH6 495 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 DDX1Q92499 740 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SMG7Q92540 1137 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 PHKBQ93100 1093 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ITFG2Q969R8 447 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 CLDN23Q96B33 292 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ZNF707Q96C28 371 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 PGBD4Q96DM1 585 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 FAM167AQ96KS9 214 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SPATA32Q96LK8 384 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SCLT1Q96NL6 688 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 TMEM175Q9BSA9 504 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 VN1R3Q9BXE9 311 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 GCOM2Q9BZD3 368 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 INO80BQ9C086 356 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 NT5C3AQ9H0P0 336 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SUDS3Q9H7L9 328 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 LY9Q9HBG7 655 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 TBC1D22BQ9NU19 505 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ZDHHC7Q9NXF8 308 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 GOLGA6AQ9NYA3 693 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ANGPTL2Q9UKU9 493 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 RAB23Q9ULC3 237 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 CTNND2Q9UQB3 1225 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 NUB1Q9Y5A7 615 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 PCDHA10Q9Y5I2 948 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 SHISA3A0PJX4 238 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 HMGB1P1B2RPK0 211 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 E7EWF7 191 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 IPO5O00410 1097 aaKnown RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 NRP1O14786 923 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 TEX28O15482 410 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 FOXD2O60548 495 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 LRP3O75074 770 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 DDHD2O94830 711 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 PLEKHA8P1O95397 391 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 SOD2P04179 222 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 RETP07949 1114 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 CYP21A2P08686 494 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 CALM1P0DP23 149 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 CALM2P0DP24 149 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 CALM3P0DP25 149 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 FGFR4P22455 802 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 SFPQP23246 707 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 CCNFP41002 786 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 TNNT3P45378 269 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 UBXN2BQ14CS0 331 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 MLF2Q15773 248 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 LONRF3Q496Y0 759 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 TWF2Q6IBS0 349 aaKnown RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 TMC3Q7Z5M5 1100 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 PLA2G4DQ86XP0 818 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 ZNF280BQ86YH2 543 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 GPR65Q8IYL9 337 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 URGCPQ8TCY9 931 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 LPPQ93052 612 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 ZNF668Q96K58 619 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 NCAPGQ9BPX3 1015 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 MTA3Q9BTC8 594 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 RPP25Q9BUL9 199 aaKnown RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 ANO3Q9BYT9 981 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 GBP3Q9H0R5 595 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 GLT8D2Q9H1C3 349 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 ACBD3Q9H3P7 528 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 PARD6AQ9NPB6 346 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 DNAJB4Q9UDY4 337 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 TMEM59LQ9UK28 342 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 RALYQ9UKM9 306 aaKnown RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 MTF2Q9Y483 593 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-247ENST00000557311 KIF3AQ9Y496 699 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 MYO10Q9HD67 2058 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 GPR179Q6PRD1 2367 aa5.41□□□□□ -1.54
ATXN3-247ENST00000557311 MYH7BA7E2Y1 1941 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ACACBO00763 2458 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 OTOGLQ3ZCN5 2332 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 hCG_1642624A0A1W2PR95 340 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 MEIS3P2A8K0S8 358 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms