RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 PPANQ9NQ55 473 aaKnown RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 HOMER3Q9NSC5 361 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 DDX56Q9NY93 547 aaKnown RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 RRP15Q9Y3B9 282 aaKnown RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 SNX9Q9Y5X1 595 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 NDUFAB1O14561 156 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.71
TMEM260-211ENST00000556648 HMGCRP04035 888 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.71
TMEM260-211ENST00000556648 CYP2B6P20813 491 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 MIPP30301 263 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 VCPP55072 806 aaKnown RBP10.65□□□□□ -0.71
TMEM260-211ENST00000556648 HUNKP57058 714 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 KYNUQ16719 465 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 OR6B2Q6IFH4 312 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 LCLAT1Q6UWP7 414 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 CYP4V2Q6ZWL3 525 aaPredicted RBP10.65□□□□□ -0.71
TMEM260-211ENST00000556648 TRMT10CQ7L0Y3 403 aaKnown RBP10.65□□□□□ -0.71
TMEM260-211ENST00000556648 SRLQ86TD4 932 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 ARFGAP2Q8N6H7 521 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 MYCBPAPQ8TBZ2 947 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 ZNF473Q8WTR7 871 aaKnown RBP10.65□□□□□ -0.71
TMEM260-211ENST00000556648 PGM2Q96G03 612 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 RNF39Q9H2S5 420 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 ZNF148Q9UQR1 794 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 NRCAMQ92823 1304 aa10.65□□□□□ -0.71
TMEM260-211ENST00000556648 SMIM35A0A1B0GVV1 85 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 E7EVH7 732 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 RASGRF2O14827 1237 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 TRUB2O95900 331 aaKnown RBP10.64□□□□□ -0.71
TMEM260-211ENST00000556648 PECAM1P16284 738 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-211ENST00000556648 KDELR1P24390 212 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 CETN2P41208 172 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 ARSEP51690 589 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 GDF10P55107 478 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 COPS2P61201 443 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 ADAM17P78536 824 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 OTUD4Q01804 1114 aaKnown RBP10.64□□□□□ -0.71
TMEM260-211ENST00000556648 GAD2Q05329 585 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 GPS1Q13098 491 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 MMRN1Q13201 1228 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 TAF1CQ15572 869 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-211ENST00000556648 ZBTB6Q15916 424 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 HP1BP3Q5SSJ5 553 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-211ENST00000556648 UBXN11Q5T124 520 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 PMF1Q6P1K2 205 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 NOTUMQ6P988 496 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 POLNQ7Z5Q5 900 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 NLRP14Q86W24 1093 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 TAB3Q8N5C8 712 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-211ENST00000556648 CCDC89Q8N998 374 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 FNIP1Q8TF40 1166 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 C9orf72Q96LT7 481 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 TMEM109Q9BVC6 243 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 NT5C1AQ9BXI3 368 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 GOLGA2P5Q9HBQ8 144 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 WDR35Q9P2L0 1181 aa10.64□□□□□ -0.71
TMEM260-211ENST00000556648 PIN4Q9Y237 131 aaKnown RBP10.64□□□□□ -0.71
TMEM260-211ENST00000556648 MYADML2A6NDP7 307 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 HAS3O00219 553 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 DNALI1O14645 258 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SPTLC1O15269 473 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CST8O60676 142 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 TTC4O95801 387 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 FGFR1P11362 822 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CREB1P16220 341 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CDR1P51861 262 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 NRLP54845 237 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SOX4Q06945 474 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 MYO1EQ12965 1108 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 FASTKD3Q14CZ7 662 aaKnown RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SNX17Q15036 470 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 TAZQ16635 292 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 QPCTQ16769 361 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CDO1Q16878 200 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 TNFAIP8L3Q5GJ75 292 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 ZNF618Q5T7W0 954 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 C9orf57Q5W0N0 161 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 DRICH1Q6PGQ1 229 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 NPNTQ6UXI9 565 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 ALKAL1Q6UXT8 129 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SESTD1Q86VW0 696 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 RFX6Q8HWS3 928 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SLC35B2Q8TB61 432 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 ACTL9Q8TC94 416 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 RXFP2Q8WXD0 754 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 USP6NLQ92738 828 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CCT8L2Q96SF2 557 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 NMRK2Q9NPI5 230 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 GPATCH2LQ9NWQ4 482 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CNTN3Q9P232 1028 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 FEZ2Q9UHY8 353 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 USP18Q9UMW8 372 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 C2CD4BA6NLJ0 364 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SGK1O00141 431 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 TRIM66O15016 1216 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 BANF1O75531 89 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 IFNB1P01574 187 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 KRT7P08729 469 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CHN1P15882 459 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms