RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 SNX13Q9Y5W8 968 aa4.43□□□□□ -1.7
SUPT16H-206ENST00000556309 LINC00473A8K010 186 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 VNN1O95497 513 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 NUDT3O95989 172 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 LMNAP02545 664 aaKnown RBP4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 CSF1RP07333 972 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 MYL3P08590 195 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 ITGB6P18564 788 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 PIK3CBP42338 1070 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 CLK3P49761 638 aaKnown RBP4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 RARRES1P49788 294 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 ITGA8P53708 1063 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 WNT3P56703 355 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 E2F2Q14209 437 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 MGAT5BQ3V5L5 792 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 SLC44A4Q53GD3 710 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 DEPDC1Q5TB30 811 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 KCTD20Q7Z5Y7 419 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 SIMC1Q8NDZ2 872 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 ATG4AQ8WYN0 398 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 RFKQ969G6 155 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 PPP2R3CQ969Q6 453 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 TTC17Q96AE7 1141 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 NMD3Q96D46 503 aaKnown RBP4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 ZNF764Q96H86 408 aaPredicted RBP4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 PDLIM2Q96JY6 352 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 A1CFQ9NQ94 594 aaKnown RBP4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 ITGB1BP2Q9UKP3 347 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 HDAC9Q9UKV0 1011 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 FER1L4A9Z1Z3 1794 aa4.42□□□□□ -1.7
SUPT16H-206ENST00000556309 COL11A2P13942 1736 aaPredicted RBP4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 WDR27A2RRH5 827 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 H7C4K7 107 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 KPNA5O15131 536 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 PMM2O15305 246 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 CYP2C9P11712 490 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 KCNA3P22001 575 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 CD38P28907 300 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 PPIFP30405 207 aaKnown RBP4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 LRPAP1P30533 357 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 LIPAP38571 399 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 GRIA3P42263 894 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 DGKEP52429 567 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 PRKAG1P54619 331 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 SATB1Q01826 763 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 LY6KQ17RY6 165 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 PRR16Q569H4 304 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 TREML2Q5T2D2 321 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 SFRP4Q6FHJ7 346 aaPredicted RBP4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 ARHGEF25Q86VW2 580 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 GAS2L3Q86XJ1 694 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 BPIFB1Q8TDL5 484 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 GLG1Q92896 1179 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 SPSB4Q96A44 273 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 PBKQ96KB5 322 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 TBCBQ99426 244 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 NELL2Q99435 816 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 SARGQ9BW04 601 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 PRDM13Q9H4Q3 707 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 AS3MTQ9HBK9 375 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 GBA2Q9HCG7 927 aaPredicted RBP4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 ASB6Q9NWX5 421 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 ZSCAN32Q9NX65 697 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 MID2Q9UJV3 735 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 TLK1Q9UKI8 766 aa4.41□□□□□ -1.7
SUPT16H-206ENST00000556309 RHPN2P1A8MT19 583 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 RAB27BO00194 218 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 FESP07332 822 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 EBLN1P0CF75 366 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 XRCC6P12956 609 aaKnown RBP eCLIP4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 SLC5A1P13866 664 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 IL1R1P14778 569 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 ZFXP17010 805 aaPredicted RBP4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 SAFBQ15424 915 aaKnown RBP eCLIP4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 NBPF8Q3BBV2 869 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 ZNF362Q5T0B9 420 aaPredicted RBP4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 TSTD2Q5T7W7 516 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 CACHD1Q5VU97 1274 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 UNC13DQ70J99 1090 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 DTX2Q86UW9 622 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 RASAL3Q86YV0 1011 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 LIX1LQ8IVB5 337 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 SLC15A3Q8IY34 581 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 DNAJB14Q8TBM8 379 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 PARD3BQ8TEW8 1205 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 PHKBQ93100 1093 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 R3HDM4Q96D70 268 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 CCDC136Q96JN2 1154 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 DUSP26Q9BV47 211 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 NUP62CLQ9H1M0 184 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 CHST8Q9H2A9 424 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 KLK15Q9H2R5 256 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 RIOX1Q9H6W3 641 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 ADARB2Q9NS39 739 aaKnown RBP4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 TBC1D23Q9NUY8 699 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 EHD3Q9NZN3 535 aa4.4□□□□□ -1.71
SUPT16H-206ENST00000556309 A1L4Q6 167 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 MBD3L4A6NDZ8 208 aaPredicted RBP4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 MBD3L3A6NE82 208 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms