RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TRIM66O15016 1216 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 LRP3O75074 770 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 CST3P01034 146 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 DLATP10515 647 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 LMO2P25791 158 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 CDR1P51861 262 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 NOP14P78316 857 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 SATB1Q01826 763 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 USP4Q13107 963 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 PUM1Q14671 1186 aaKnown RBP eCLIP13.57□□□□□ -0.246e-12■□□□□ 10.8
HNRNPC-221ENST00000555883 PON2Q15165 354 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 ZNF77Q15935 545 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 LAIR1Q6GTX8 287 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 CC2D1AQ6P1N0 951 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 LONP2Q86WA8 852 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 GPIHBP1Q8IV16 184 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 SLC9A9Q8IVB4 645 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 MYLPFQ96A32 169 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 SYAP1Q96A49 352 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 RMDN1Q96DB5 314 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 PCED1BQ96HM7 432 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 MMS19Q96T76 1030 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 GZF1Q9H116 711 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 GPR179Q6PRD1 2367 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 CLIC2O15247 247 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 HCRTO43612 131 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 KLRC4O43908 158 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 ATG13O75143 517 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 ATP2C2O75185 946 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 GNL1P36915 607 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 CYP2J2P51589 502 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 TNNC1P63316 161 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 GRSF1Q12849 480 aaKnown RBP eCLIP13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 CUL4BQ13620 913 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 PKP1Q13835 747 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 MTF1Q14872 753 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 CCDC142Q17RM4 750 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 WDR72Q3MJ13 1102 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 FBXO43Q4G163 708 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 SDHAF4Q5VUM1 108 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 Q6ZS52 159 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 DENND5BQ6ZUT9 1274 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 SCN4BQ8IWT1 228 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 NELFCDQ8IXH7 590 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 RIN3Q8TB24 985 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 OSCP1Q8WVF1 389 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 ATP2A3Q93084 1043 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 CHFRQ96EP1 664 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 ELOVL4Q9GZR5 314 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 XYLT2Q9H1B5 865 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 BLZF1Q9H2G9 400 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 SNX25Q9H3E2 840 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 SLC39A2Q9NP94 309 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 RBM12Q9NTZ6 932 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 DMAC2Q9NW81 257 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 GMEB2Q9UKD1 530 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 ARHGAP26Q9UNA1 814 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 DENND4CQ5VZ89 1909 aa13.56□□□□□ -0.24
HNRNPC-221ENST00000555883 OBSL1O75147 1896 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 OTOL1A6NHN0 477 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 PRR5-ARHGAP8B1AHC4 643 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 CHURC1-FNTBB4DL54 471 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 EXOC3O60645 756 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 CKMP06732 381 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 DRD1P21728 446 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 BDNFP23560 247 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 CMA1P23946 247 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 ANXA13P27216 316 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 CASP1P29466 404 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 GRIK1P39086 918 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 AFMP43652 599 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 PSMC1P62191 440 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 ARHGAP8P85298 464 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 LMNB2Q03252 620 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 TRPC3Q13507 836 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 KCNB1Q14721 858 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 FOXD4L5Q5VV16 416 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 WDR5BQ86VZ2 330 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 CPA6Q8N4T0 437 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 STKLD1Q8NE28 680 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 PARD3BQ8TEW8 1205 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 FOXD4L4Q8WXT5 416 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 ZNF516Q92618 1163 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 CCDC127Q96BQ5 260 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 MRPL45Q9BRJ2 306 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 EBF3Q9H4W6 596 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 HPSEQ9Y251 543 aa13.55□□□□□ -0.24
HNRNPC-221ENST00000555883 FAM237AA0A1B0GTK4 181 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 PDXKO00764 312 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 FOXD2O60548 495 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 OLFM2O95897 454 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms