RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 SOWAHAQ2M3V2 549 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 FAM71AQ8IYT1 594 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 TOP6BLQ8N6T0 577 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 HASPINQ8TF76 798 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 CPLX3Q8WVH0 158 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 KBTBD7Q8WVZ9 684 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 SUSD3Q96L08 255 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 SPAG5Q96R06 1193 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 EPC1Q9H2F5 836 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 CISHQ9NSE2 258 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 ADAM28Q9UKQ2 775 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 USP18Q9UMW8 372 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 L1RE1Q9UN81 338 aa12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 SMG5Q9UPR3 1016 aaKnown RBP12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 GCN1Q92616 2671 aaKnown RBP12.5□□□□□ -0.41
MTHFD1-211ENST00000555709 C2orf16Q68DN1 1984 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 PATJQ8NI35 1801 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 LILRB5O75023 590 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 TACC1O75410 805 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 CYP11A1P05108 521 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 FECHP22830 423 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 SOX5P35711 763 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 BRCC3P46736 316 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 SHC2P98077 582 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 KCNT2Q6UVM3 1135 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 TMC5Q6UXY8 1006 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 CCDC149Q6ZUS6 474 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 DPH6Q7L8W6 267 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 CCDC186Q7Z3E2 898 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 GPR149Q86SP6 731 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 RNF168Q8IYW5 571 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 SLC39A11Q8N1S5 342 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 PDCL2Q8N4E4 241 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 ZBTB44Q8NCP5 570 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 SLC22A17Q8WUG5 538 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 SYN2Q92777 582 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 NELL1Q92832 810 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 SENP8Q96LD8 212 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 PANX2Q96RD6 677 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 COLEC11Q9BWP8 271 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 NUCKS1Q9H1E3 243 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 AIPL1Q9NZN9 384 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 HMGXB4Q9UGU5 601 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 FBXO4Q9UKT5 387 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 FAN1Q9Y2M0 1017 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 NME7Q9Y5B8 376 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 IGF2RP11717 2491 aa12.49□□□□□ -0.41
MTHFD1-211ENST00000555709 SF3B1O75533 1304 aaKnown RBP eCLIP12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 CARNS1A5YM72 827 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 I3L4J1 428 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 CYB561D2O14569 222 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 HUS1O60921 280 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 CILPO75339 1184 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 ALDH2P05091 517 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 PROS1P07225 676 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 FAM163BP0C2L3 166 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 SRFP11831 508 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 ODC1P11926 461 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 CD58P19256 250 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 WARSP23381 471 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 PPM1AP35813 382 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 STAT1P42224 750 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 CDH8P55286 799 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 YWHAEP62258 255 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 MEA1Q16626 185 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 SFMBT2Q5VUG0 894 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 WDR59Q6PJI9 974 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 DSTYKQ6XUX3 929 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 OSTM1Q86WC4 334 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 ADGRF2Q8IZF7 708 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 SLC44A3Q8N4M1 653 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 TTC39CQ8N584 583 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 RBBP8NLQ8NC74 664 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 APPL2Q8NEU8 664 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 ZNF397Q8NF99 534 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 NETO1Q8TDF5 533 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 GPR152Q8TDT2 470 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 SECISBP2LQ93073 1101 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 IGSF21Q96ID5 467 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 ZNF558Q96NG5 402 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 TWNKQ96RR1 684 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 MMS19Q96T76 1030 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 VN1R3Q9BXE9 311 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 PCDHB8Q9UN66 801 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 PCDHGA2Q9Y5H1 932 aa12.48□□□□□ -0.41
MTHFD1-211ENST00000555709 SOBPA7XYQ1 873 aa12.47□□□□□ -0.41
MTHFD1-211ENST00000555709 NT5C1B-RDH14C9J2C7 533 aa12.47□□□□□ -0.41
MTHFD1-211ENST00000555709 GABRDO14764 452 aa12.47□□□□□ -0.41
MTHFD1-211ENST00000555709 TADA2AO75478 443 aa12.47□□□□□ -0.41
MTHFD1-211ENST00000555709 GFPT2O94808 682 aa12.47□□□□□ -0.41
MTHFD1-211ENST00000555709 FERP16591 822 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms