RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 INSL5Q9Y5Q6 135 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 ATP8B3O60423 1300 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 TRIM66O15016 1216 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 MED7O43513 233 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 TBX10O75333 385 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 GFPT2O94808 682 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 ADCY5O95622 1261 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 CCDC172P0C7W6 258 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 FERP16591 822 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 NPR3P17342 541 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 ATF6P18850 670 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 CDC25BP30305 580 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 GNA15P30679 374 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 HNRNPH3P31942 346 aaKnown RBP13.44□□□□□ -0.26
SYNE2-219ENST00000555323 ALDH1A3P47895 512 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 CACNA2D1P54289 1103 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 RPL10AP62906 217 aaKnown RBP13.44□□□□□ -0.26
SYNE2-219ENST00000555323 DLX2Q07687 328 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-219ENST00000555323 PLD1Q13393 1074 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 CCDC85BQ15834 202 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-219ENST00000555323 PPM1LQ5SGD2 360 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 ZNF677Q86XU0 584 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-219ENST00000555323 SLC35F5Q8WV83 523 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 SMOQ99835 787 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 PRKD2Q9BZL6 878 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 LHX5Q9H2C1 402 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 SFXN1Q9H9B4 322 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 PNPLA8Q9NP80 782 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 TMEM30AQ9NV96 361 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 TSPAN16Q9UKR8 245 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 YIPF1Q9Y548 306 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 ASB3Q9Y575 518 aa13.44□□□□□ -0.26
SYNE2-219ENST00000555323 MTCL1Q9Y4B5 1905 aaKnown RBP13.43□□□□□ -0.26
SYNE2-219ENST00000555323 CCDC195A0A1B0GUA6 201 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 LRRC53A6NM62 1247 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 RFPL2O75678 378 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 AP1G2O75843 785 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 BEST1O76090 585 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 FAM200BP0CF97 657 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
SYNE2-219ENST00000555323 ADORA2BP29275 332 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 CASP14P31944 242 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 GRIK1P39086 918 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 PRKCIP41743 596 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 GPD2P43304 727 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 ITIH3Q06033 890 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 DDR2Q16832 855 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.43□□□□□ -0.26
SYNE2-219ENST00000555323 GPR149Q86SP6 731 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 TTC30AQ86WT1 665 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 MICALL1Q8N3F8 863 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 EPS8L1Q8TE68 723 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 PSMG2Q969U7 264 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 ZNF707Q96C28 371 aaPredicted RBP13.43□□□□□ -0.26
SYNE2-219ENST00000555323 MYRFLQ96LU7 910 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 KCNK16Q96T55 309 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 SEPT5Q99719 369 aaPredicted RBP13.43□□□□□ -0.26
SYNE2-219ENST00000555323 MED10Q9BTT4 135 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 ADAM7Q9H2U9 754 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 DMAP1Q9NPF5 467 aaPredicted RBP13.43□□□□□ -0.26
SYNE2-219ENST00000555323 COMMD8Q9NX08 183 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 IL37Q9NZH6 218 aa13.43□□□□□ -0.26
SYNE2-219ENST00000555323 NOCTQ9UK39 431 aaKnown RBP13.43□□□□□ -0.26
SYNE2-219ENST00000555323 PLXNA3P51805 1871 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 HHLA1C9JL84 531 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 F8VP50 259 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 TNFRSF10BO14763 440 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 THAP12O43422 761 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 MICAL2O94851 1124 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 CALCAP01258 141 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 LRG1P02750 347 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 SETSIPP0DME0 302 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 CDH5P33151 784 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-219ENST00000555323 KRT9P35527 623 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 RPL34P49207 117 aaKnown RBP13.42□□□□□ -0.26
SYNE2-219ENST00000555323 MRE11P49959 708 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 PDE6CP51160 858 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 CDR1P51861 262 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 BCAT1P54687 386 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 EPHB3P54753 998 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 TWF1Q12792 350 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 GSE1Q14687 1217 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 SFMBT2Q5VUG0 894 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 TMC6Q7Z403 805 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 DNAJB7Q7Z6W7 309 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-219ENST00000555323 NOP9Q86U38 636 aaKnown RBP13.42□□□□□ -0.26
SYNE2-219ENST00000555323 DRC7Q8IY82 874 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 WDTC1Q8N5D0 677 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 OR8K1Q8NGG5 319 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 CPLX3Q8WVH0 158 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 HLA-CQ95604 372 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 SYT11Q9BT88 431 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 LRRC3Q9BY71 257 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 UBE2ZQ9H832 354 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-219ENST00000555323 KRT82Q9NSB4 513 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms