RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	GATM	P50440	423 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	GPC3	P51654	580 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ERVFC1	P60507	584 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ATP2C1	P98194	919 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	SPIRE1	Q08AE8	756 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	MGAT3	Q09327	533 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	REST	Q13127	1097 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ORC2	Q13416	577 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	TARBP2	Q15633	366 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	COL28A1	Q2UY09	1125 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	TMCO4	Q5TGY1	634 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	RRAGB	Q5VZM2	374 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	TWF2	Q6IBS0	349 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	CES5A	Q6NT32	575 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	PDILT	Q8N807	584 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	RNF149	Q8NC42	400 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	PSPC1	Q8WXF1	523 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	DDX1	Q92499	740 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	KCNN1	Q92952	543 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	P2RX5	Q93086	422 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	IFT74	Q96LB3	600 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	CLIC6	Q96NY7	704 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	APOL6	Q9BWW8	343 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	CSRNP2	Q9H175	543 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	POLR3F	Q9H1D9	316 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ATP6V0A4	Q9HBG4	840 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	GPRC5C	Q9NQ84	441 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	C19orf73	Q9NVV2	129 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	SIT1	Q9Y3P8	196 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	PCDHGA2	Q9Y5H1	932 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	COL4A3BP	Q9Y5P4	624 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	PTPN13	Q12923	2485 aa		5.12	□□□□□ -1.59
ATXN3-231	ENST00000554994	ADAMTS20	P59510	1910 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	NPHP3-ACAD11	A0A0J9YXS1	232 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	TBKBP1	A7MCY6	615 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	HIDE1	A8MVS5	230 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994		K7ERI5	159 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	GIPC1	O14908	333 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	SPTLC2	O15270	562 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	KCNK5	O95279	499 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	EOMES	O95936	686 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	BMP15	O95972	392 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	F13A1	P00488	732 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	PLA2G2A	P14555	144 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	DARS	P14868	501 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	SFPQ	P23246	707 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	HOXC8	P31273	242 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	LONP1	P36776	959 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ANP32A	P39687	249 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	PRPH	P41219	470 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ME1	P48163	572 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	RARRES1	P49788	294 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	PEX3	P56589	373 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	LINC00310	P59036	64 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	GRIN1	Q05586	938 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	KCNC3	Q14003	757 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	MXD4	Q14582	209 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	KARS	Q15046	597 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	CDKAL1	Q5VV42	579 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	KIAA1211L	Q6NV74	962 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	B3GNT9	Q6UX72	402 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	FAM214B	Q7L5A3	538 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	FAM228A	Q86W67	206 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	CDR2L	Q86X02	465 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZBTB8OS	Q8IWT0	167 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ST13P5	Q8NFI4	369 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	DEPTOR	Q8TB45	409 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	CPB2	Q96IY4	423 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	EPSTI1	Q96J88	318 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	NECTIN4	Q96NY8	510 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	USP28	Q96RU2	1077 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	TCHP	Q9BT92	498 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	LSM14B	Q9BX40	385 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	FTHL17	Q9BXU8	183 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	TRIM6	Q9C030	488 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	NT5C3A	Q9H0P0	336 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	GBP3	Q9H0R5	595 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	GZF1	Q9H116	711 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ADAM7	Q9H2U9	754 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ADAMTS10	Q9H324	1103 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZCCHC4	Q9H5U6	513 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ATP13A1	Q9HD20	1204 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	NPHS2	Q9NP85	383 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	RXFP3	Q9NSD7	469 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	ZSCAN32	Q9NX65	697 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	CFAP45	Q9UL16	551 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	RAB23	Q9ULC3	237 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	PIN4	Q9Y237	131 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	INPP5F	Q9Y2H2	1132 aa		5.11	□□□□□ -1.59
ATXN3-231	ENST00000554994	GOLGA6L4	A6NEF3	574 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	PYCARD-AS1	I3L0S3	204 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	ARHGAP6	O43182	974 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	TBC1D4	O60343	1298 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	MGEA5	O60502	916 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	HIP1R	O75146	1068 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	LYPLA2	O95372	231 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	PLA2G4B	P0C869	781 aa		5.1	□□□□□ -1.59
ATXN3-231	ENST00000554994	FGFR1	P11362	822 aa		5.1	□□□□□ -1.59

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