RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	RIC1	Q4ADV7	1423 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	LTBP1	Q14766	1721 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	LRRC14B	A6NHZ5	514 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	YDJC	A8MPS7	323 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	GRM6	O15303	877 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	SGTA	O43765	313 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	ALDH1L1	O75891	902 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	IL33	O95760	270 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	ABHD16A	O95870	558 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	ELANE	P08246	267 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	SPATA31D3	P0C874	917 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	LBX1	P52954	281 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	DSC2	Q02487	901 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	TLE1	Q04724	770 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	CXCL9	Q07325	125 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	AIMP1	Q12904	312 aa	Known RBP	6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	DACT2	Q5SW24	774 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	KCNV1	Q6PIU1	500 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	SPATA31D4	Q6ZUB0	917 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	CATIP	Q7Z7H3	387 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	CPEB3	Q8NE35	698 aa	Known RBP	6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	NSUN6	Q8TEA1	469 aa	Known RBP	6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	JDP2	Q8WYK2	163 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	MYEOV	Q96EZ4	313 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	RBM17	Q96I25	401 aa	Known RBP	6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	SORCS2	Q96PQ0	1159 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	ADAM2	Q99965	735 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	UTP14A	Q9BVJ6	771 aa	Known RBP	6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	KRTAP4-5	Q9BYR2	181 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	IP6K2	Q9UHH9	426 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	USP25	Q9UHP3	1055 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	ATP11B	Q9Y2G3	1177 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	ATP6V0A2	Q9Y487	856 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	FPGT-TNNI3K	V9GXZ4	949 aa		6.4	□□□□□ -1.38
PSMC6-208	ENST00000554956	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.4	□□□□□ -1.39
PSMC6-208	ENST00000554956	ADAMTSL1	Q8N6G6	1762 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	CCDC88A	Q3V6T2	1871 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	MARCH11	A6NNE9	402 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	CHL1	O00533	1208 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	PPIP5K2	O43314	1243 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	CD1A	P06126	327 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	HSPA8	P11142	646 aa	Known RBP	6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	KRT4	P19013	534 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	FGFR4	P22455	802 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	GMPS	P49915	693 aa	Predicted RBP	6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	EPHB1	P54762	984 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	NOMO3	P69849	1222 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	OCA2	Q04671	838 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	TTF1	Q15361	905 aa	Predicted RBP	6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	DEFB115	Q30KQ5	88 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	NOMO2	Q5JPE7	1267 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	GADL1	Q6ZQY3	521 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	VRK3	Q8IV63	474 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	TBC1D15	Q8TC07	691 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	VRK1	Q99986	396 aa	Predicted RBP	6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	FAM30A	Q9NZY2	134 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	CHPF2	Q9P2E5	772 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	WDR33	Q9C0J8	1336 aa	Known RBP	6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956	CACNA1S	Q13698	1873 aa		6.39	□□□□□ -1.39
PSMC6-208	ENST00000554956		A0A1B0GTW7	788 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	GAGE12B	A1L429	117 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	GAGE12H	A6NDE8	117 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	TMEM200C	A6NKL6	621 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	PARN	O95453	639 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	CFI	P05156	583 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	ALAS1	P13196	640 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	GCSH	P23434	173 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	DDX6	P26196	483 aa	Known RBP eCLIP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	CTCF	P49711	727 aa	Predicted RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	HSD11B2	P80365	405 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	MCL1	Q07820	350 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	SLFN5	Q08AF3	891 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	REST	Q13127	1097 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	DDX10	Q13206	875 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	RAB39A	Q14964	217 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	FLYWCH1	Q4VC44	716 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	KHDC1	Q4VXA5	237 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	PARP10	Q53GL7	1025 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	PPP1R42	Q7Z4L9	355 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	LDLRAD3	Q86YD5	345 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	MAPKAPK5	Q8IW41	473 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	CELF1	Q92879	486 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	HSPBAP1	Q96EW2	488 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	MARS2	Q96GW9	593 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	MRI	Q9BWK5	157 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	GLIS2	Q9BZE0	524 aa	Predicted RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	DKK2	Q9UBU2	259 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	TRMT112	Q9UI30	125 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	ABT1	Q9ULW3	272 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	CFAP20	Q9Y6A4	193 aa	Known RBP	6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	MAPK8IP3	Q9UPT6	1336 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	COL4A1	P02462	1669 aa		6.38	□□□□□ -1.39
PSMC6-208	ENST00000554956	DICER1	Q9UPY3	1922 aa	Known RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	KDM3B	Q7LBC6	1761 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	ARFGEF2	Q9Y6D5	1785 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	BBOX1	O75936	387 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	HAUS5	O94927	633 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	PF4V1	P10720	104 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	PDC	P20941	246 aa		6.37	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms