RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ANKFY1Q9P2R3 1169 aa6.14□□□□□ -1.43
CHD8-207ENST00000554384 DKK4Q9UBT3 224 aa6.14□□□□□ -1.43
CHD8-207ENST00000554384 SERTAD3Q9UJW9 196 aa6.14□□□□□ -1.43
CHD8-207ENST00000554384 NDRG4Q9ULP0 352 aaKnown RBP6.14□□□□□ -1.43
CHD8-207ENST00000554384 SHOC2Q9UQ13 582 aa6.14□□□□□ -1.43
CHD8-207ENST00000554384 SSX2IPQ9Y2D8 614 aa6.14□□□□□ -1.43
CHD8-207ENST00000554384 NOX1Q9Y5S8 564 aa6.14□□□□□ -1.43
CHD8-207ENST00000554384 CDY1Q9Y6F8 540 aa6.14□□□□□ -1.43
CHD8-207ENST00000554384 MYADML2A6NDP7 307 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 CLCA1A8K7I4 914 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 PODXLO00592 558 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 SPDEFO95238 335 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 CSF1RP07333 972 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 ADRB1P08588 477 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 XRCC6P12956 609 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD8-207ENST00000554384 ATICP31939 592 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 MAGEA10P43363 369 aaPredicted RBP6.13□□□□□ -1.43
CHD8-207ENST00000554384 VAV2P52735 878 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 LOXL3P58215 753 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 RPS7P62081 194 aaKnown RBP6.13□□□□□ -1.43
CHD8-207ENST00000554384 MGAT5BQ3V5L5 792 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 INO80DQ53TQ3 878 aaPredicted RBP6.13□□□□□ -1.43
CHD8-207ENST00000554384 RAP1GAP2Q684P5 730 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 TTC9BQ8N6N2 239 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 ZNF527Q8NB42 609 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 SNX19Q92543 992 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 DVL3Q92997 716 aaPredicted RBP6.13□□□□□ -1.43
CHD8-207ENST00000554384 BOD1Q96IK1 185 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 ZBTB45Q96K62 511 aaPredicted RBP6.13□□□□□ -1.43
CHD8-207ENST00000554384 PLEKHG4BQ96PX9 1271 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 PTDSS2Q9BVG9 487 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 MAGEB5Q9BZ81 275 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 AMBRA1Q9C0C7 1298 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.13□□□□□ -1.432e-8■■■□□ 19.2
CHD8-207ENST00000554384 GALNT9Q9HCQ5 603 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 SLC2A4RGQ9NR83 387 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 PAXBP1Q9Y5B6 917 aa6.13□□□□□ -1.43
CHD8-207ENST00000554384 MORC2Q9Y6X9 1032 aaPredicted RBP6.13□□□□□ -1.43
CHD8-207ENST00000554384 A0A0B4J269 797 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 LGALS16A8MUM7 142 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 E7ENX8 843 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 PIP5K1BO14986 540 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 PPM1DO15297 605 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 FFAR2O15552 330 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 RGS10O43665 173 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 SRGAP2O75044 1071 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 LMNAP02545 664 aaKnown RBP6.12□□□□□ -1.43
CHD8-207ENST00000554384 HGFP14210 728 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 CD6P30203 668 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 PRKAG1P54619 331 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 ADAM17P78536 824 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 TAP2Q03519 686 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 GRM1Q13255 1194 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 TUBB3Q13509 450 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 SCRIBQ14160 1630 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 RAB30Q15771 203 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 LY6KQ17RY6 165 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 ZNF750Q32MQ0 723 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 SPDYE7PQ495Y7 208 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 CCDC38Q502W7 563 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 FBXO38Q6PIJ6 1188 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 KIAA0408Q6ZU52 694 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 MICALCLQ6ZW33 695 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 GPR149Q86SP6 731 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 MYCT1Q8N699 235 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 ATG16L2Q8NAA4 619 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 FANCBQ8NB91 859 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 LPIN2Q92539 896 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 SELENOOQ9BVL4 669 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 PCDHAC1Q9H158 963 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 HEYLQ9NQ87 328 aaPredicted RBP6.12□□□□□ -1.43
CHD8-207ENST00000554384 PARPBPQ9NWS1 579 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 RGL1Q9NZL6 768 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 ZMYND8Q9ULU4 1186 aaPredicted RBP6.12□□□□□ -1.43
CHD8-207ENST00000554384 SCAF8Q9UPN6 1271 aaKnown RBP6.12□□□□□ -1.43
CHD8-207ENST00000554384 TESMINQ9Y4I5 508 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 PCDHGB3Q9Y5G1 929 aa6.12□□□□□ -1.43
CHD8-207ENST00000554384 NESP48681 1621 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 CENPVL1A0A0U1RR11 272 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 GAGE12HA6NDE8 117 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 AGPSO00116 658 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 PIAS2O75928 621 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 CDKL5O76039 1030 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 VNN1O95497 513 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 PPP3CBP16298 524 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 YY1P25490 414 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 LRPAP1P30533 357 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 NTSR1P30989 418 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 SCAPQ12770 1279 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 EFEMP1Q12805 493 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 KRT72Q14CN4 511 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 PFKFB4Q16877 469 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 INSCQ1MX18 579 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 PGBD2Q6P3X8 592 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 RNF207Q6ZRF8 634 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 KRT28Q7Z3Y7 464 aa6.11□□□□□ -1.43
CHD8-207ENST00000554384 ANKRD42Q8N9B4 389 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms