RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 C1QTNF9P0C862 333 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 BCKDHBP21953 392 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 DDIT3P35638 169 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 OPRD1P41143 372 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 BFSP1Q12934 665 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 DMC1Q14565 340 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 PDGFRLQ15198 375 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 PSAPL1Q6NUJ1 521 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 LIMS2Q7Z4I7 341 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 DCP1BQ8IZD4 617 aaKnown RBP12.42□□□□□ -0.42
TUBB3-204ENST00000554116 KDF1Q8NAX2 398 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-204ENST00000554116 OSCP1Q8WVF1 389 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 DNAJC19Q96DA6 116 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 CLIC6Q96NY7 704 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 GCNAQ96QF7 691 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 USP28Q96RU2 1077 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 ACBD6Q9BR61 282 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-204ENST00000554116 MAGED2Q9UNF1 606 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-204ENST00000554116 GCN1Q92616 2671 aaKnown RBP12.41□□□□□ -0.42
TUBB3-204ENST00000554116 ATP2C2O75185 946 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 ITGB3P05106 788 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 CSH1P0DML2 217 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 CSH2P0DML3 217 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 POLR2BP30876 1174 aaKnown RBP12.41□□□□□ -0.42
TUBB3-204ENST00000554116 CASP5P51878 434 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 SLC39A14Q15043 492 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 TAF12Q16514 161 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 SV2CQ496J9 727 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 INTS6LQ5JSJ4 861 aaKnown RBP12.41□□□□□ -0.42
TUBB3-204ENST00000554116 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 FAM171BQ6P995 826 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 RASSF3Q86WH2 238 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 SFR1Q86XK3 245 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 ARL14EPQ8N8R7 260 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-204ENST00000554116 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 MRPS31Q92665 395 aaKnown RBP12.41□□□□□ -0.42
TUBB3-204ENST00000554116 CD101Q93033 1021 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 ZHX3Q9H4I2 956 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 DUS2Q9NX74 493 aaKnown RBP12.41□□□□□ -0.42
TUBB3-204ENST00000554116 DDX43Q9NXZ2 648 aaKnown RBP12.41□□□□□ -0.42
TUBB3-204ENST00000554116 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 AGAP1Q9UPQ3 857 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 NME7Q9Y5B8 376 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 PLXND1Q9Y4D7 1925 aa12.41□□□□□ -0.42
TUBB3-204ENST00000554116 PTPRJQ12913 1337 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 MYMKA6NI61 221 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 APBB3O95704 486 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 CAVIN2O95810 425 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 KRT18P05783 430 aaKnown RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 TCF3P15923 654 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 SPINK2P20155 84 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 LMO2P25791 158 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 TXLNAP40222 546 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 NOVA1P51513 510 aaKnown RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 USP46P62068 366 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 CREB5Q02930 508 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 NFE2Q16621 373 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 SOWAHAQ2M3V2 549 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 CFAP221Q4G0U5 840 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 FBXO43Q4G163 708 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 PMS2CLQ68D20 193 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 SLFN12LQ6IEE8 588 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 DYMQ7RTS9 669 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 FRMD1Q8N878 549 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 OLIG1Q8TAK6 271 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 SH3RF2Q8TEC5 729 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 KBTBD7Q8WVZ9 684 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 LARP4BQ92615 738 aaKnown RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 SAAL1Q96ER3 474 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 EDEM2Q9BV94 578 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 ABCB6Q9NP58 842 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 GDAP2Q9NXN4 497 aa12.4□□□□□ -0.42
TUBB3-204ENST00000554116 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
TUBB3-204ENST00000554116 ADAMTS9Q9P2N4 1935 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 IL18RAPO95256 599 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 IRX4P78413 519 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 TFAMQ00059 246 aaKnown RBP12.39□□□□□ -0.43
TUBB3-204ENST00000554116 TSPY1Q01534 308 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 STK38Q15208 465 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 CC2D1AQ6P1N0 951 aaPredicted RBP12.39□□□□□ -0.43
TUBB3-204ENST00000554116 NT5DC4Q86YG4 428 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 LINC00301Q8NCQ3 95 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 POMGNT1Q8WZA1 660 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 ZNF396Q96N95 335 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms