RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GNAI3P08754 354 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 KRT10P13645 584 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 CPEP16870 476 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 THBS4P35443 961 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 PHKA1P46020 1223 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 PIK3CGP48736 1102 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 MASP1P48740 699 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 GNAI1P63096 354 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 HYAL1Q12794 435 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 GTF2H3Q13889 308 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 SEMA3AQ14563 771 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 PTPROQ16827 1216 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 RNF219Q5W0B1 726 aaPredicted RBP3.04□□□□□ -1.92
SRP54-204ENST00000553923 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 TTC7BQ86TV6 843 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 AMOTL1Q8IY63 956 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 LRRC71Q8N4P6 559 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 C1orf162Q8NEQ5 155 aaPredicted RBP3.04□□□□□ -1.92
SRP54-204ENST00000553923 IGFBPL1Q8WX77 278 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 GLG1Q92896 1179 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 FOXP1Q9H334 677 aaPredicted RBP3.04□□□□□ -1.92
SRP54-204ENST00000553923 MAN1C1Q9NR34 630 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 SERPINB13Q9UIV8 391 aa3.04□□□□□ -1.92
SRP54-204ENST00000553923 CFAP20Q9Y6A4 193 aaKnown RBP3.04□□□□□ -1.92
SRP54-204ENST00000553923 LRRC14BA6NHZ5 514 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 ERVV-2B6SEH9 535 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 PRSS44E7EML9 344 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 DSCR3O14972 297 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 KRT86O43790 486 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 USP1O94782 785 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 SCP2P22307 547 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 MT3P25713 68 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 PPIFP30405 207 aaKnown RBP3.03□□□□□ -1.92
SRP54-204ENST00000553923 RENBPP51606 427 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 PDE1AP54750 535 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 KRT81Q14533 505 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 CLUL1Q15846 466 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 KRTAP27-1Q3LI81 207 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 TBC1D25Q3MII6 688 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 CERKLQ49MI3 558 aaPredicted RBP3.03□□□□□ -1.92
SRP54-204ENST00000553923 RNASE12Q5GAN4 147 aaKnown RBP3.03□□□□□ -1.92
SRP54-204ENST00000553923 RNF187Q5TA31 235 aaPredicted RBP3.03□□□□□ -1.92
SRP54-204ENST00000553923 MTHFD1LQ6UB35 978 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 DEF8Q6ZN54 512 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 ZBTB8BQ8NAP8 495 aaPredicted RBP3.03□□□□□ -1.92
SRP54-204ENST00000553923 FAM46DQ8NEK8 389 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 GPATCH3Q96I76 525 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 SLC46A1Q96NT5 459 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 SIGLEC11Q96RL6 698 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 TMX1Q9H3N1 280 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 GNL3LQ9NVN8 582 aaKnown RBP3.03□□□□□ -1.92
SRP54-204ENST00000553923 ASIC5Q9NY37 505 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 KLHL42Q9P2K6 505 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 HESX1Q9UBX0 185 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 ZDHHC8Q9ULC8 765 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 PROCRQ9UNN8 238 aa3.03□□□□□ -1.92
SRP54-204ENST00000553923 ZMYM2Q9UBW7 1377 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 FZD9O00144 591 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 EXOC3O60645 756 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 CNOT3O75175 753 aaKnown RBP3.02□□□□□ -1.93
SRP54-204ENST00000553923 FTH1P19P0C7X4 201 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 HSD3B2P26439 372 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 CNGA1P29973 690 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 KCNJ5P48544 419 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 GPSM2P81274 684 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 ZNF268Q14587 947 aaPredicted RBP3.02□□□□□ -1.93
SRP54-204ENST00000553923 FAM160B1Q5W0V3 765 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 EGFLAMQ63HQ2 1017 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 C18orf65Q6ZTR6 163 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 ABHD11Q8NFV4 315 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 PNISRQ8TF01 805 aaKnown RBP3.02□□□□□ -1.93
SRP54-204ENST00000553923 SOCS4Q8WXH5 440 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 DDX17Q92841 729 aaKnown RBP3.02□□□□□ -1.93
SRP54-204ENST00000553923 R3HDM4Q96D70 268 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 PSMD1Q99460 953 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 TRMOQ9BU70 441 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 EFHD1Q9BUP0 239 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 PTDSS2Q9BVG9 487 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 FAM126AQ9BYI3 521 aaPredicted RBP3.02□□□□□ -1.93
SRP54-204ENST00000553923 VPS33BQ9H267 617 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 MRPL46Q9H2W6 279 aaKnown RBP3.02□□□□□ -1.93
SRP54-204ENST00000553923 HIPK2Q9H2X6 1198 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 GLOD4Q9HC38 313 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 SLAMF7Q9NQ25 335 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 HEY2Q9UBP5 337 aa3.02□□□□□ -1.93
SRP54-204ENST00000553923 UBE2Q2LH0YL09 131 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 M0QYG6 137 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 TLR2O60603 784 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 CRYABP02511 175 aaKnown RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 RPLP2P05387 115 aaKnown RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 VIL1P09327 827 aaKnown RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 PIM1P11309 404 aaPredicted RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 PSG1P11464 419 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 FPR3P25089 353 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 ALDH5A1P51649 535 aaPredicted RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 LOXL3P58215 753 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 GHRHRQ02643 423 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 FAM187BQ17R55 369 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 PGM2L1Q6PCE3 622 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms