RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 GRIN2DO15399 1336 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 GOLGA6L10A6NI86 522 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 SIGLEC16A6NMB1 481 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 PPFIA2O75334 1257 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 RALAP11233 206 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 FLT3P36888 993 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 KCNJ1P48048 391 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 PLTPP55058 493 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 GSCP56915 257 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-218ENST00000553486 ADAM17P78536 824 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 INCA1Q0VD86 236 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 ZNF268Q14587 947 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-218ENST00000553486 PPP1R7Q15435 360 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 CNGA2Q16280 664 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 CYP4A22Q5TCH4 519 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 RASIP1Q5U651 963 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 DAB2IPQ5VWQ8 1189 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 PSRC1Q6PGN9 363 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-218ENST00000553486 RUFY4Q6ZNE9 571 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 NIPA2Q8N8Q9 360 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 C1orf54Q8WWF1 131 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 SNX27Q96L92 541 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 HEXIM2Q96MH2 286 aaKnown RBP16.16■□□□□ 0.18
ABCD4-218ENST00000553486 TWNKQ96RR1 684 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 SEZ6LQ9BYH1 1024 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 OSBPL8Q9BZF1 889 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 DCLK3Q9C098 648 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 SYNCQ9H7C4 482 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 CDHR5Q9HBB8 845 aa16.16■□□□□ 0.18
ABCD4-218ENST00000553486 MICAL2O94851 1124 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 KRT14P02533 472 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 GNAT1P11488 350 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 CYP2C18P33260 490 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 GJC1P36383 396 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 RPL21P46778 160 aaKnown RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 PSMC1P62191 440 aaKnown RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 LLGL1Q15334 1064 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 UAP1Q16222 522 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 PTPN20Q4JDL3 420 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 ODF2Q5BJF6 829 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 BEST2Q8NFU1 509 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 DNAJB3Q8WWF6 145 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 ARL8AQ96BM9 186 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 COL25A1Q9BXS0 654 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 TRIM6Q9C030 488 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 HIPK3Q9H422 1215 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 DDX56Q9NY93 547 aaKnown RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 GRHL1Q9NZI5 618 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 ACRP10323 421 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 KRT3P12035 628 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 COPS2P61201 443 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 KLF1Q13351 362 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 GRIN2CQ14957 1233 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 TTMPQ5BVD1 217 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 ZFYVE27Q5T4F4 411 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 ZDHHC24Q6UX98 284 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 ZNF365Q70YC5 407 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 TMEM130Q8N3G9 435 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 NME8Q8N427 588 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 ATL2Q8NHH9 583 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 TIFAQ96CG3 184 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 NT5C1AQ9BXI3 368 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 EIF2AQ9BY44 585 aaKnown RBP16.15■□□□□ 0.18
ABCD4-218ENST00000553486 TXLNGYQ9BZA5 131 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 MIS12Q9H081 205 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 HMGXB4Q9UGU5 601 aa16.15■□□□□ 0.18
ABCD4-218ENST00000553486 PDCD11Q14690 1871 aaKnown RBP16.14■□□□□ 0.17
ABCD4-218ENST00000553486 C17orf102A2RUQ5 167 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 GOLGA8SH3BPF8 625 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 O00370 1275 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 GAS8O95995 478 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 NDST1P52848 882 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 ZNF252P-AS1Q0IIN9 211 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 NFX1Q12986 1120 aaKnown RBP16.14■□□□□ 0.17
ABCD4-218ENST00000553486 CALCOCO2Q13137 446 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 ORC1Q13415 861 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 SNX1Q13596 522 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 STILQ15468 1287 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 CCNG2Q16589 344 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 CEP85LQ5SZL2 805 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 FBXO25Q8TCJ0 367 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 FNIP1Q8TF40 1166 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 TSPAN18Q96SJ8 248 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 HEMGNQ9BXL5 484 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 TRPV6Q9H1D0 765 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 ZNF576Q9H609 170 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 IL23AQ9NPF7 189 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 CHST7Q9NS84 486 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 CYTH4Q9UIA0 394 aa16.14■□□□□ 0.17
ABCD4-218ENST00000553486 SCN1AP35498 2009 aa16.13■□□□□ 0.17
ABCD4-218ENST00000553486 HMGB1P1B2RPK0 211 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-218ENST00000553486 F8VP50 259 aa16.13■□□□□ 0.17
ABCD4-218ENST00000553486 M0QYV0 167 aa16.13■□□□□ 0.17
ABCD4-218ENST00000553486 TREHO43280 583 aa16.13■□□□□ 0.17
ABCD4-218ENST00000553486 KRT1P04264 644 aa16.13■□□□□ 0.17
ABCD4-218ENST00000553486 MYZAPP0CAP1 466 aa16.13■□□□□ 0.17
ABCD4-218ENST00000553486 ATF7P17544 494 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-218ENST00000553486 PSMA2P25787 234 aa16.13■□□□□ 0.17
ABCD4-218ENST00000553486 GABRB2P47870 512 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms