RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZMYM5Q9UJ78 669 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 A8MXQ7 604 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 SPECC1L-ADORA2AF8WAN1 911 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.31
CDK4-215ENST00000553237 RHOBTB3O94955 611 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 STAU1O95793 577 aaKnown RBP16.96■□□□□ 0.31
CDK4-215ENST00000553237 CHRNB1P11230 501 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 PTPN1P18031 435 aaKnown RBP16.96■□□□□ 0.31
CDK4-215ENST00000553237 RAP1GAPP47736 663 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 MLLT6P55198 1093 aaPredicted RBP16.96■□□□□ 0.31
CDK4-215ENST00000553237 NCOA4Q13772 614 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 ZNF699Q32M78 642 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 ZC3H14Q6PJT7 736 aaKnown RBP16.96■□□□□ 0.31
CDK4-215ENST00000553237 TXNDC11Q6PKC3 985 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 VSTM1Q6UX27 236 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 TRMT2BQ96GJ1 504 aaKnown RBP16.96■□□□□ 0.31
CDK4-215ENST00000553237 SMYD3Q9H7B4 428 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 RBM12Q9NTZ6 932 aaKnown RBP16.96■□□□□ 0.31
CDK4-215ENST00000553237 TDP1Q9NUW8 608 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 FBXO4Q9UKT5 387 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 DMDP11532 3685 aa16.96■□□□□ 0.31
CDK4-215ENST00000553237 COL4A2P08572 1712 aa16.96■□□□□ 0.3
CDK4-215ENST00000553237 CLDN5O00501 218 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 VNN1O95497 513 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 LMNAP02545 664 aaKnown RBP16.95■□□□□ 0.3
CDK4-215ENST00000553237 FAM163BP0C2L3 166 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 ANXA13P27216 316 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 CTHP32929 405 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 AP3M2P53677 418 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 USP46P62068 366 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 CLDN10P78369 228 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 ZNF667Q5HYK9 610 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 TRIM68Q6AZZ1 485 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 SCARA5Q6ZMJ2 495 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 RIN3Q8TB24 985 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 SPATA17Q96L03 361 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 SLC22A12Q96S37 553 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 CHRDQ9H2X0 955 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 SEMA4AQ9H3S1 761 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 FRMD4BQ9Y2L6 1034 aa16.95■□□□□ 0.3
CDK4-215ENST00000553237 FAM186AA6NE01 2351 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 TRAV19A0A0A6YYK7 116 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 F8VP50 259 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 KIF20AO95235 890 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 PON2Q15165 354 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 ITPRIPL2Q3MIP1 535 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 ZNF528Q3MIS6 628 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 RALGPS2Q86X27 583 aaPredicted RBP16.94■□□□□ 0.3
CDK4-215ENST00000553237 ARL14EPQ8N8R7 260 aaPredicted RBP16.94■□□□□ 0.3
CDK4-215ENST00000553237 B3GALNT2Q8NCR0 500 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 TMC2Q8TDI7 906 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 TMEM174Q8WUU8 243 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 MSANTD3Q96H12 275 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 FAM83CQ9BQN1 747 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 B3GNT5Q9BYG0 378 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 SDCBP2Q9H190 292 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 EBF3Q9H4W6 596 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 VRTNQ9H8Y1 702 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDK4-215ENST00000553237 TRAF3IP3Q9Y228 551 aa16.94■□□□□ 0.3
CDK4-215ENST00000553237 NUP210Q8TEM1 1887 aaPredicted RBP16.94■□□□□ 0.3
CDK4-215ENST00000553237 C2orf78A6NCI8 922 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 SOBPA7XYQ1 873 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 TRIM66O15016 1216 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 CKMP06732 381 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 USP17L7P0C7H9 530 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 ARSAP15289 507 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 NR2F2P24468 414 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 CACNA2D1P54289 1103 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 GAS6Q14393 721 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 KCNB1Q14721 858 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 WDR44Q5JSH3 913 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 C1orf220Q5T0J3 134 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 CC2D1AQ6P1N0 951 aaPredicted RBP16.93■□□□□ 0.3
CDK4-215ENST00000553237 C1orf228Q6PIY5 440 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 DENND5BQ6ZUT9 1274 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 SV2AQ7L0J3 742 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 ATRIPQ8WXE1 791 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 C8orf48Q96LL4 319 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 KIF9Q9HAQ2 790 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 HPS4Q9NQG7 708 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 PRMT8Q9NR22 394 aaPredicted RBP16.93■□□□□ 0.3
CDK4-215ENST00000553237 TMEM30AQ9NV96 361 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 VPS13AQ96RL7 3174 aa16.93■□□□□ 0.3
CDK4-215ENST00000553237 OTOL1A6NHN0 477 aaPredicted RBP16.92■□□□□ 0.3
CDK4-215ENST00000553237 KINO60870 393 aaKnown RBP16.92■□□□□ 0.3
CDK4-215ENST00000553237 AKAP3O75969 853 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 TRIM49P0CI25 452 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 TRIM49CP0CI26 452 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 HDCP19113 662 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
CDK4-215ENST00000553237 VAMP7P51809 220 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 FAM160A1Q05DH4 1040 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 RUNX3Q13761 415 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 LRRC32Q14392 662 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 ZNF268Q14587 947 aaPredicted RBP16.92■□□□□ 0.3
CDK4-215ENST00000553237 SGSM1Q2NKQ1 1148 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 ZACNQ401N2 412 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms